RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PECRQ9BY49 303 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 ASH2LQ9UBL3 628 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 FUCA1P04066 466 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 QDPRP09417 244 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 THBS4P35443 961 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 FAM26DQ5JW98 314 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 MORN1Q5T089 497 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 FYTTD1Q96QD9 318 aaKnown RBP13.1□□□□□ -0.31
PTPN13-203ENST00000427191 ADAT1Q9BUB4 502 aaKnown RBP13.1□□□□□ -0.31
PTPN13-203ENST00000427191 BCL2L10Q9HD36 194 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 KIF13BQ9NQT8 1826 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 B4DEV8 164 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 GP1BAP07359 652 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 C6orf15Q6UXA7 325 aaPredicted RBP13.1□□□□□ -0.31
PTPN13-203ENST00000427191 DOLPP1Q86YN1 238 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 TTC9BQ8N6N2 239 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 TOX2Q96NM4 488 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 CA3P07451 260 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 ETFDHQ16134 617 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 FDX2Q6P4F2 183 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
PTPN13-203ENST00000427191 OR1L4Q8NGR5 311 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 UBALD1Q8TB05 177 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 APOBEC3DQ96AK3 386 aaPredicted RBP13.1□□□□□ -0.31
PTPN13-203ENST00000427191 SPSB1Q96BD6 273 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 C5P01031 1676 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 HIST1H1CP16403 213 aaKnown RBP13.09□□□□□ -0.31
PTPN13-203ENST00000427191 C11orf87Q6NUJ2 197 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 OR2T8A6NH00 312 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 CDK5R1Q15078 307 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 ZBTB44Q8NCP5 570 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 CLDN34H7C241 214 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 AKR7A3O95154 331 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 TP53INP2Q8IXH6 220 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 OR51E1Q8TCB6 317 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 HAPLN2Q9GZV7 340 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 AMMECR1Q9Y4X0 333 aaPredicted RBP13.09□□□□□ -0.31
PTPN13-203ENST00000427191 ZFC3H1O60293 1989 aaKnown RBP13.09□□□□□ -0.31
PTPN13-203ENST00000427191 DGCR2P98153 550 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 DPTQ07507 201 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 SYT11Q9BT88 431 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 CCSO14618 274 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 FGF20Q9NP95 211 aaPredicted RBP13.09□□□□□ -0.31
PTPN13-203ENST00000427191 ASCC3Q8N3C0 2202 aaKnown RBP13.09□□□□□ -0.31
PTPN13-203ENST00000427191 UBE2L5PA0A1B0GUS4 154 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 HMGN4O00479 90 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 GJA4P35212 333 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 RHOBP62745 196 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 STAC2Q6ZMT1 411 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 UBAC2Q8NBM4 344 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 PBOV1Q9GZY1 135 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 C5orf49A4QMS7 147 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 MOB3AQ96BX8 217 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 ADGRL4Q9HBW9 690 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 KNL1Q8NG31 2342 aa13.09□□□□□ -0.31
PTPN13-203ENST00000427191 CD27P26842 260 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 EPHA2P29317 976 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 PPICP45877 212 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 NKAIN1Q4KMZ8 207 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 ELFN2Q5R3F8 820 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 CMBLQ96DG6 245 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 ADGRG7Q96K78 797 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 C12orf49Q9H741 205 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 ST3GAL6Q9Y274 331 aa13.08□□□□□ -0.31
PTPN13-203ENST00000427191 ZBTB25P24278 435 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 DHRS7BQ6IAN0 325 aaPredicted RBP13.08□□□□□ -0.32
PTPN13-203ENST00000427191 FUNDC1Q8IVP5 155 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 BCORP1Q8N888 145 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 OR52N5Q8NH56 324 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 COPS9Q8WXC6 57 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 CHST2Q9Y4C5 530 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 DUXBA0A1W2PPF3 345 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 HNF1AP20823 631 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 FAM74A3Q4VXF1 159 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 PRR27Q6MZM9 219 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF66Q6ZN08 573 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 Q6ZSR9 355 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 FITM1A5D6W6 292 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 PLPP1O14494 284 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM241Q24JQ0 296 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 OR52N4Q8NGI2 321 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 TTC9Q92623 222 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 SDF2Q99470 211 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 UQCC1Q9NVA1 299 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 NAT8BQ9UHF3 227 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 NPPBP16860 134 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 VASH2Q86V25 355 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 MS4A18H0YCH9 400 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 BTG2P78543 158 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 MS4A18Q3C1V0 323 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF343Q6P1L6 599 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 OR5D13Q8NGL4 314 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 DUSP21Q9H596 190 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 GLDNQ6ZMI3 551 aaPredicted RBP13.08□□□□□ -0.32
PTPN13-203ENST00000427191 SLC16A11Q8NCK7 471 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 DAPP1Q9UN19 280 aa13.08□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF785A8K8V0 405 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms