RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CMTM4Q8IZR5 234 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 NPEPL1Q8NDH3 523 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 OR51H1Q8NH63 302 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 S1PR3Q99500 378 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 ZNF2Q9BSG1 426 aaPredicted RBP12.38□□□□□ -0.43
RPL28-202ENST00000426763 CTLA4P16410 223 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 GNB2P62879 340 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 PLA2G7Q13093 441 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 OR2T2Q6IF00 324 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 OR10R2Q8NGX6 335 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 ZNF416Q9BWM5 594 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 HEYLQ9NQ87 328 aaPredicted RBP12.38□□□□□ -0.43
RPL28-202ENST00000426763 EXOGQ9Y2C4 368 aaKnown RBP12.38□□□□□ -0.43
RPL28-202ENST00000426763 A0A0D9SG52 128 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 AQP7P3A6NL99 342 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 DHRS3O75911 302 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 HTR2BP41595 481 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 C3AR1Q16581 482 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 RFPL4BQ6ZWI9 263 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 BHLHA15Q7RTS1 189 aaPredicted RBP12.38□□□□□ -0.43
RPL28-202ENST00000426763 H2BFWTQ7Z2G1 175 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 ADGRL4Q9HBW9 690 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 SLC23A1Q9UHI7 598 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 TMEM200CA6NKL6 621 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 GPANK1O95872 356 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 IGLV3-19P01714 112 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 GNB3P16520 340 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 ATF4P18848 351 aaPredicted RBP12.37□□□□□ -0.43
RPL28-202ENST00000426763 TUSC5Q8IXB3 177 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 ICAM5Q9UMF0 924 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 DTX4Q9Y2E6 619 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 DNPH1O43598 174 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 SPRY1O43609 319 aaPredicted RBP12.37□□□□□ -0.43
RPL28-202ENST00000426763 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 TGIF2Q9GZN2 237 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 SLC26A1Q9H2B4 701 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 POFUT1Q9H488 388 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 SLC17A2O00624 439 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 ZNF883P0CG24 379 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 C4orf45Q96LM5 186 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 SULT1C2O00338 296 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 RPA2P15927 270 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 RFX2P48378 723 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 LRRC10Q5BKY1 277 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 C1QL3Q5VWW1 255 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 OR5T1Q8NG75 326 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 TMEM165Q9HC07 324 aa12.37□□□□□ -0.43
RPL28-202ENST00000426763 NDUFB3O43676 98 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 DEFA4P12838 97 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 TBPP20226 339 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 RPS27AP62979 156 aaKnown RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 UBA52P62987 128 aaKnown RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 TSEN54Q7Z6J9 526 aaKnown RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 LYSMD2Q8IV50 215 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 OR2AK2Q8NG84 335 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 LIN37Q96GY3 246 aaPredicted RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 RALGAPA2Q2PPJ7 1873 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 AQP8O94778 261 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 EPXP11678 715 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 OMGP23515 440 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 DGCR2P98153 550 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 OR10K2Q6IF99 312 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 VWCEQ96DN2 955 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 TTTY12Q9BZ98 90 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 FAM221AA4D161 298 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 CD96P40200 585 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 KLF3P57682 345 aaPredicted RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 RTL8BQ17RB0 113 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 OR52W1Q6IF63 320 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 SLC36A1Q7Z2H8 476 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 KIAA1456Q9P272 454 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 NGFRP08138 427 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 PPP1CBP62140 327 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 ATPAF1Q5TC12 328 aaPredicted RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 PRAMEF6Q5VXH4 476 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 BTLAQ7Z6A9 289 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 OR4D11Q8NGI4 311 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 PRR7Q8TB68 274 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 DYNC2LI1Q8TCX1 351 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 PELI1Q96FA3 418 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 SHARPINQ9H0F6 387 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 EIF4EP06730 217 aaKnown RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 CD3EP07766 207 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 BEX5Q5H9J7 111 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 RBMXL3Q8N7X1 1067 aaKnown RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 ZNF486Q96H40 463 aaPredicted RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 MYOZ1Q9NP98 299 aaPredicted RBP12.36□□□□□ -0.43
RPL28-202ENST00000426763 SBF1O95248 1867 aa12.36□□□□□ -0.43
RPL28-202ENST00000426763 TRGV10A0A0A0MS01 117 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 LNP1A1A4G5 178 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms