RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CSF3P09919 207 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 NR4A2P43354 598 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 SLC37A1P57057 533 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 FAM74A1Q5RGS3 127 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 ELP2Q6IA86 826 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 SH2D5Q6ZV89 423 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 LINC01560Q8TB33 94 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 PELI1Q96FA3 418 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 ANKRD60Q9BZ19 345 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 SLA2Q9H6Q3 261 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 TRAPPC4Q9Y296 219 aa15.12■□□□□ 0.01
SYNGAP1-202ENST00000418600 HBE1P02100 147 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 SLC25A26Q70HW3 274 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 OR10K1Q8NGX5 313 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 ZNF721Q8TF20 911 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 TGIF2Q9GZN2 237 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 PLEKHF2Q9H8W4 249 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 TAS2R4Q9NYW5 299 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 TMEM30CPA0ZSE6 113 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 TMPRSS2O15393 492 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 FOXL2P58012 376 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 VMA21Q3ZAQ7 101 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 C4orf17Q53FE4 359 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 LCN10Q6JVE6 187 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 C9orf40Q8IXQ3 194 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 OR56B4Q8NH76 319 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 PCGF1Q9BSM1 259 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 C20orf202A1L168 122 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 PMS2P2O95744 297 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 F2RP25116 425 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 MS4A2Q01362 244 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 ADGRE4PQ86SQ3 457 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 SAMD10Q9BYL1 202 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 RNF7Q9UBF6 113 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 B9D1Q9UPM9 204 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 FOXS1O43638 330 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 UBE2G2P60604 165 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 ZNF91Q05481 1191 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 HEPHL1Q6MZM0 1159 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 MOGAT3Q86VF5 341 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 PTDSS2Q9BVG9 487 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 OR51J1Q9H342 316 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 ISYNA1Q9NPH2 558 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 HS3ST3B1Q9Y662 390 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 SDCBPO00560 298 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 NPY4RP50391 375 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 RPS27AP62979 156 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 UBA52P62987 128 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 MLLT11Q13015 90 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 CREB3L2Q70SY1 520 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 PLPP7Q8NBV4 271 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 PTP4A1Q93096 173 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 HEYLQ9NQ87 328 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 CLN8Q9UBY8 286 aa15.11■□□□□ 0.01
SYNGAP1-202ENST00000418600 TRIP11Q15643 1979 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 SPDEFO95238 335 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 RPA2P15927 270 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 HNF4GQ14541 408 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 Q6ZPB1 254 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 RPS10P5Q9NQ39 176 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 RAE1P78406 368 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 C6orf89Q6UWU4 347 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 GHSRQ92847 366 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 SLC35E1Q96K37 410 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 GREM1O60565 184 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 MPPED2Q15777 294 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 TMPRSS11FQ6ZWK6 438 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 DEDD2Q8WXF8 326 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 KCTD12Q96CX2 325 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 RASL11BQ9BPW5 248 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 BANF2Q9H503 90 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 SLC23A1Q9UHI7 598 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 TIPARPQ7Z3E1 657 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 OR2AE1Q8NHA4 323 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 TEX37Q96LM6 180 aa15.1■□□□□ 0.01
SYNGAP1-202ENST00000418600 A0A0B4J203 849 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 GABRPO00591 440 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 TLE4Q04727 773 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 ZNF141Q15928 474 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 GLYATL3Q5SZD4 288 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 DRAM2Q6UX65 266 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 SSX9Q7RTT3 188 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 CMTM2Q8TAZ6 248 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 COMMD5Q9GZQ3 224 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 TINAGQ9UJW2 476 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 TNFSF12O43508 249 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 GFRA1P56159 465 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 OR10AD1Q8NGE0 317 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 MYO7AQ13402 2215 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 FOCADQ5VW36 1801 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 ZNF236Q9UL36 1845 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 OR6M1Q8NGM8 313 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 EDARADDQ8WWZ3 215 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 ZNF416Q9BWM5 594 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 ACKR4Q9NPB9 350 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 AGAP14A8MT82 685 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 ZNF701M0R085 212 aaPredicted RBP15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 CA5AP35218 305 aa15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 ATPAF1Q5TC12 328 aaPredicted RBP15.09■□□□□ 0.01
SYNGAP1-202ENST00000418600 CST9LP1Q5W188 147 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms