RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 WASH3PC4AMC7 463 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 MCRIP1C9JLW8 97 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 D6RAR5 112 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SMLR1H3BR10 107 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 J3QRE1 110 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 HMGN4O00479 90 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 IMPA2O14732 288 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 YKT6O15498 198 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 GPRIN2O60269 458 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 GALR3O60755 368 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 FMO6PO60774 539 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RDH16O75452 317 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SCO1O75880 301 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 NDUFB6O95139 128 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RCBTB2O95199 551 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PRAMEF12O95522 483 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 C1orf105O95561 183 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ETHE1O95571 254 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SLC16A8O95907 504 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 HPP00738 406 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 IFNGP01579 166 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 C1QCP02747 245 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ALDOBP05062 364 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 KLK1P06870 262 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PROS1P07225 676 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ASGR1P07306 291 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 NMBP08949 121 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 UCHL1P09936 223 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CALCBP10092 127 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SFTPCP11686 197 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ICAM2P13598 275 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PRG2P13727 222 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 GABRA1P14867 456 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 MYOGP15173 224 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RPS2P15880 293 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 RPA2P15927 270 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 MGMTP16455 207 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CXCL3P19876 107 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PDHA2P29803 388 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 MAT2AP31153 395 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 TRIM23P36406 574 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OMPP47874 163 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR3A1P47881 315 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CCR8P51685 355 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ARPP19P56211 112 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CAV3P56539 151 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 VSX2P58304 361 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 KRTAP10-6P60371 365 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 BEX3Q00994 111 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PLD1Q13393 1074 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 BTN1A1Q13410 526 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 HTR4Q13639 388 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ZNF345Q14585 488 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PPA1Q15181 289 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 IRF4Q15306 451 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 FAM189A2Q15884 450 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CCL15Q16663 113 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ZSWIM7Q19AV6 140 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 MICBQ29980 383 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 NDUFAF6Q330K2 333 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ZNF791Q3KP31 576 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 PABPC1L2AQ5JQF8 200 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 KHDRBS2Q5VWX1 349 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 MFSD14CQ5VZR4 134 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 DMKNQ6E0U4 476 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 ELP2Q6IA86 826 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SLC8B1Q6J4K2 584 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 NIPAL3Q6P499 406 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TNFAIP8L2Q6P589 184 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 C22orf39Q6P5X5 142 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 LRRN1Q6UXK5 716 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TMIGD1Q6UXZ0 262 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ZNF620Q6ZNG0 422 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 MBOAT2Q6ZWT7 520 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TMUB2Q71RG4 321 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 COX8CQ7Z4L0 72 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CEACAM19Q7Z692 300 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TMCO2Q7Z6W1 182 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 LHFPL3Q86UP9 236 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RANBP3LQ86VV4 465 aaPredicted RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 C17orf64Q86WR6 236 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CDH26Q8IXH8 852 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SPAG16Q8N0X2 631 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SYS1Q8N2H4 156 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SVBPQ8N300 66 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 HDDC3Q8N4P3 179 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ATAD1Q8NBU5 361 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 PXT1Q8NFP0 134 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR1M1Q8NGA1 313 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR6C4Q8NGE1 309 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR52H1Q8NGJ2 320 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR6T1Q8NGN1 323 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR5M9Q8NGP3 310 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR9A1PQ8NGU1 263 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR5W2Q8NH69 310 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 FIBINQ8TAL6 211 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 GTF3AQ92664 365 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 HIST1H2ACQ93077 130 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 NEIL2Q969S2 332 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms