RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 OTULINQ96BN8 352 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 SGK3Q96BR1 496 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 CLPTM1LQ96KA5 538 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 DUX5Q96PT3 197 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 THTPAQ9BU02 230 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 MMADHCQ9H3L0 296 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 MED20Q9H944 212 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 OOEPA6NGQ2 149 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 C3orf80F5H4A9 247 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 TNFRSF13BO14836 293 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 LIPFP07098 398 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 CFL1P23528 166 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 BPIFB3P59826 476 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 FAM3AP98173 230 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 SLC16A9Q7RTY1 509 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 OR52H1Q8NGJ2 320 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 OR8S1Q8NH09 359 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 CANT1Q8WVQ1 401 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 SLC25A28Q96A46 364 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 REEP6Q96HR9 211 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 C1orf147Q96MC9 270 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 TECTBQ96PL2 329 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 OR51V1Q9H2C8 321 aa14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 PDP1Q9P0J1 537 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-208ENST00000416159 hCG_1807616A0A1W2PRN6 198 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 C22orf46C9J442 243 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 PRR23D1E9PI22 279 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 ADAM20O43506 726 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 LHBP01229 141 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 HMGN1P05114 100 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 RNASE1P07998 156 aaKnown RBP14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 PRR23D2P0DMB1 279 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 POU1F1P28069 291 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 FGF12P61328 243 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 HOXA4Q00056 320 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 SLC9A3R2Q15599 337 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 SNCBQ16143 134 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 ZNF826PQ6ZT77 177 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 FAM57BQ71RH2 274 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 PRSS45Q7RTY3 260 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 TIGD4Q8IY51 512 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 GCSAMQ8N6F7 178 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 ZNF747Q9BV97 191 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 OR10A2Q9H208 303 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 ZNF556Q9HAH1 456 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 RNPEPL1Q9HAU8 725 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 CTSZQ9UBR2 303 aa14.62□□□□□ -0.07
PDLIM2-208ENST00000416159 hCG_38984A0A1B0GV85 526 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 TIPRLO75663 272 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 H2BFMP0C1H6 154 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 OPRL1P41146 370 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 ZNF121P58317 390 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 GINS1Q14691 196 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 C11orf91Q3C1V1 193 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 GPR157Q5UAW9 335 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 TMEM179BQ7Z7N9 219 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 ZNF454Q8N9F8 522 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 CSNK2A3Q8NEV1 391 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 PGAM5Q96HS1 289 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 RGCCQ9H4X1 137 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 DNAJC27Q9NZQ0 273 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 KIF17Q9P2E2 1029 aa14.61□□□□□ -0.07
PDLIM2-208ENST00000416159 ZNF879B4DU55 563 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 P2RY10O00398 339 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 E2F6O75461 281 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 GYPAP02724 150 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 OSMP13725 252 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 ANXA8P13928 327 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 EGR1P18146 543 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 GSK3AP49840 483 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 TEX36Q5VZQ5 186 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 PLBD1Q6P4A8 553 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 FAM90A1Q86YD7 464 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 C11orf53Q8IXP5 236 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 PNLDC1Q8NA58 520 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 OR1M1Q8NGA1 313 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 OTOSQ8NHW6 89 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 THEM6Q8WUY1 208 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 ZDHHC16Q969W1 377 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 AMELYQ99218 206 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 PRDM13Q9H4Q3 707 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 YY1AP1Q9H869 796 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 BRD7Q9NPI1 651 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 KAAG1Q9UBP8 84 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 PCDHGB1Q9Y5G3 927 aa14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 SOX21Q9Y651 276 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-208ENST00000416159 PRODHO43272 600 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 SPRY1O43609 319 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 ECDO95905 644 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 LYNP07948 512 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 MUC1P15941 1255 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 CFHR2P36980 270 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 GNALP38405 381 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 NAA10P41227 235 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 IL13RA1P78552 427 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 CDK5Q00535 292 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 DNAL1Q4LDG9 190 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 KLHL12Q53G59 568 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 C16orf87Q6PH81 154 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms