RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CDKL1Q00532 357 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RUNX1Q01196 453 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SLC18A2Q05940 514 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 KIR2DS5Q14953 304 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ELAVL1Q15717 326 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 C3AR1Q16581 482 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SRSF7Q16629 238 aaKnown RBP eCLIP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 LTC4SQ16873 150 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 LRRC75BQ2VPJ9 315 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SCGB2B2Q4G0G5 96 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GAGE13Q4V321 117 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TFDP3Q5H9I0 405 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RABL3Q5HYI8 236 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PYY3Q5JQD4 70 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM69Q5SWH9 247 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 FAM162BQ5T6X4 162 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CST9Q5W186 159 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GRHL2Q6ISB3 625 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 KIRREL2Q6UWL6 708 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM184AQ6ZMB5 413 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ANKRD37Q7Z713 158 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CLNKQ7Z7G1 428 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SLC22A15Q8IZD6 547 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RYBPQ8N488 228 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CBR4Q8N4T8 237 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 FITM2Q8N6M3 262 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF614Q8N883 585 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GJC3Q8NFK1 279 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 OR9I1Q8NGQ6 314 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ZNRF2Q8NHG8 242 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SLC7A13Q8TCU3 470 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 LRRC15Q8TF66 581 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 DEDD2Q8WXF8 326 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 BADQ92934 168 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 NEIL2Q969S2 332 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 HIST1H2BAQ96A08 127 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PYCR2Q96C36 320 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 DNAJC19Q96DA6 116 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 WBP1Q96G27 269 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TIMD4Q96H15 378 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF488Q96MN9 340 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GPR82Q96P67 336 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RBP7Q96R05 134 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PNKPQ96T60 521 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ATP5SQ99766 215 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CMSS1Q9BQ75 279 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 LXNQ9BS40 222 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TAPBPLQ9BX59 468 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 VN1R3Q9BXE9 311 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RSPO3Q9BXY4 272 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 LINC00470Q9BZP3 86 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM126AQ9H061 195 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 FAM49AQ9H0Q0 323 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ABCG5Q9H222 651 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 OR51J1Q9H342 316 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CPVLQ9H3G5 476 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CDCP1Q9H5V8 836 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SLC52A3Q9NQ40 469 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 HINT3Q9NQE9 182 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SLC17A5Q9NRA2 495 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PHPT1Q9NRX4 125 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ABHD10Q9NUJ1 306 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 AURKAIP1Q9NWT8 199 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 C1orf123Q9NWV4 160 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 DLL3Q9NYJ7 618 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 IL36GQ9NZH8 169 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM216Q9P0N5 145 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 OR1A1Q9P1Q5 309 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 HSPB8Q9UJY1 196 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PILRBQ9UKJ0 227 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TP53TG1Q9Y2A0 90 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RCL1Q9Y2P8 373 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 MRPS17Q9Y2R5 130 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 AK6Q9Y3D8 172 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ETV7Q9Y603 341 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 WSB1Q9Y6I7 421 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 V9GYS6 101 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TEX14Q8IWB6 1497 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ARHGAP23Q9P227 1491 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 YLPM1P49750 1951 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CHD5Q8TDI0 1954 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 BORCS7-ASMTA0A0B4J1R7 106 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 A0A0J9YY10 115 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF816-ZNF321PA0A0X1KG74 233 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SMIM28A0A1B0GU29 152 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 EXOC1LA0A1B0GW35 172 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 A0A1B0GX78 115 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM72A0PK05 275 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM218A2RU14 115 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 MAP1LC3B2A6NCE7 125 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 CASTOR2A6NHX0 329 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 OR5H1A6NKK0 313 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 USP27XA6NNY8 438 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 B4DGG1 531 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF587BE7ETH6 402 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 G3V4G9 280 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 H0YL77 283 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 TAAR5O14804 337 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 DEGS1O15121 323 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 CRXO43186 299 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms