RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ALPLP05186 524 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 IRF2P14316 349 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 CFL1P23528 166 aaKnown RBP15.81■□□□□ 0.12
TRIM56-202ENST00000412507 SEC61A1P61619 476 aaKnown RBP15.81■□□□□ 0.12
TRIM56-202ENST00000412507 DEGS2Q6QHC5 323 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 SLC35F2Q8IXU6 374 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 C10orf67Q8IYJ2 551 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 SPERTQ8NA61 448 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 OR11L1Q8NGX0 322 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 Q8TCH9 128 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 RAB3IPQ96QF0 476 aaPredicted RBP15.81■□□□□ 0.12
TRIM56-202ENST00000412507 OR8B4Q96RC9 309 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 MDFIQ99750 246 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 RGCCQ9H4X1 137 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 ADGRL4Q9HBW9 690 aa15.81■□□□□ 0.12
TRIM56-202ENST00000412507 PPIAL4EA0A075B759 164 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.8■□□□□ 0.12
TRIM56-202ENST00000412507 CEACAM18A8MTB9 384 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 F5H0A9 414 aaPredicted RBP15.8■□□□□ 0.12
TRIM56-202ENST00000412507 PPIAL4DF5H284 164 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 PTBP3O95758 552 aaKnown RBP15.8■□□□□ 0.12
TRIM56-202ENST00000412507 PNPP00491 289 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 GRPP07492 148 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 PPIAL4FP0DN26 164 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 ZFP36P26651 326 aaKnown RBP15.8■□□□□ 0.12
TRIM56-202ENST00000412507 HOXA4Q00056 320 aaPredicted RBP15.8■□□□□ 0.12
TRIM56-202ENST00000412507 KLBQ86Z14 1044 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF679Q8IYX0 411 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 C19orf18Q8NEA5 215 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 OR51G2Q8NGK0 314 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 OR8S1Q8NH09 359 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 ASB17Q8WXJ9 295 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 LYZL4Q96KX0 146 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 PPP1R3EQ9H7J1 279 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 FN3KRPQ9HA64 309 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 S100A14Q9HCY8 104 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 USE1Q9NZ43 259 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 IKZF2Q9UKS7 526 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 PPIAL4AQ9Y536 164 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 ORC6Q9Y5N6 252 aa15.8■□□□□ 0.12
TRIM56-202ENST00000412507 A0A0G2JMP0 313 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 A0A0X1KG70 313 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 TMEM269A0A1B0GVZ9 245 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 MAGEB4O15481 346 aaPredicted RBP15.79■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF254O75437 659 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 FOXH1O75593 365 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 AVPP01185 164 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 CXCR4P61073 352 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 ROM1Q03395 351 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 OR8B8Q15620 311 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 ZIK1Q3SY52 487 aaPredicted RBP15.79■□□□□ 0.12
TRIM56-202ENST00000412507 DCAF12L2Q5VW00 463 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 CBR4Q8N4T8 237 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 CSNK2A3Q8NEV1 391 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 OR4M2Q8NGB6 313 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 OR8J1Q8NGP2 316 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 TMEM246Q9BRR3 403 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 TMPRSS13Q9BYE2 586 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 C1orf123Q9NWV4 160 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 FAM206AQ9NX38 181 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 HAO2Q9NYQ3 351 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 RNF7Q9UBF6 113 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 WARS2Q9UGM6 360 aaKnown RBP15.79■□□□□ 0.12
TRIM56-202ENST00000412507 RHBDD3Q9Y3P4 386 aa15.79■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF670-ZNF695F2Z2N8 137 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 WNT2P09544 360 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 ACKR3P25106 362 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 ALDH3A2P51648 485 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 RIDAP52758 137 aaKnown RBP15.78■□□□□ 0.12
TRIM56-202ENST00000412507 CDC42P60953 191 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 MZT1Q08AG7 82 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF404Q494X3 552 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF322Q6U7Q0 402 aaPredicted RBP15.78■□□□□ 0.12
TRIM56-202ENST00000412507 C1orf229Q6ZS94 237 aaPredicted RBP15.78■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF826PQ6ZT77 177 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 BOLLQ8N9W6 283 aaKnown RBP15.78■□□□□ 0.12
TRIM56-202ENST00000412507 PLPP7Q8NBV4 271 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 FAM81AQ8TBF8 368 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 UBE2FQ969M7 185 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 EME1Q96AY2 570 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 MNTQ99583 582 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 APOL4Q9BPW4 351 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 PAPOLGQ9BWT3 736 aaKnown RBP15.78■□□□□ 0.12
TRIM56-202ENST00000412507 C14orf119Q9NWQ9 140 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 CLN6Q9NWW5 311 aa15.78■□□□□ 0.12
TRIM56-202ENST00000412507 LOC105371242A0A075B767 164 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 ACOD1A6NK06 481 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 A6NLC8 198 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 PHYHO14832 338 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 PHF1O43189 567 aaPredicted RBP15.77■□□□□ 0.12
TRIM56-202ENST00000412507 APOL3O95236 402 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 RPS2P15880 293 aaKnown RBP15.77■□□□□ 0.12
TRIM56-202ENST00000412507 HTR1FP30939 366 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 DCTDP32321 178 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 GNALP38405 381 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 MFGE8Q08431 387 aaPredicted RBP15.77■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF829Q3KNS6 432 aaPredicted RBP15.77■□□□□ 0.12
TRIM56-202ENST00000412507 ESCO2Q56NI9 601 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 WDR86Q86TI4 376 aa15.77■□□□□ 0.12
TRIM56-202ENST00000412507 DEFB108BQ8NET1 73 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms