RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TMEM89A2RUT3 159 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 PRR23D1E9PI22 279 aaPredicted RBP16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 SELENOFO60613 162 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 FKBP6O75344 327 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 PRR23D2P0DMB1 279 aaPredicted RBP16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 CBX1P83916 185 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 CDK5Q00535 292 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 GFOD2Q3B7J2 385 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 KLHL12Q53G59 568 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 TMEM236Q5W0B7 351 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 SHFQ7M4L6 423 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 CPOQ8IVL8 374 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 BBS1Q8NFJ9 593 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 MMADHCQ9H3L0 296 aaPredicted RBP16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 ZNF556Q9HAH1 456 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 CTSZQ9UBR2 303 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 A6NLC8 198 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 C22orf46C9J442 243 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 LGALS8O00214 317 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 PHYHO14832 338 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 DDOSTP39656 456 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 COMPP49747 757 aaPredicted RBP16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 OR8B8Q15620 311 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 RBMS3Q6XE24 437 aaKnown RBP16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 DOK3Q7L591 496 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 WDR86Q86TI4 376 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 PARP8Q8N3A8 854 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 SPERTQ8NA61 448 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 UPRTQ96BW1 309 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 C1orf147Q96MC9 270 aaPredicted RBP16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 NUDT16L1Q9BRJ7 211 aaKnown RBP16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 DNAJB9Q9UBS3 223 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 KLHDC2Q9Y2U9 406 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 hCG_38984A0A1B0GV85 526 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 ANKRD30BLA7E2S9 258 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 H2BFMP0C1H6 154 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 PPIAL4GP0DN37 164 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 HOXB6P17509 224 aaKnown RBP16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 GCSAMQ8N6F7 178 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 PAPD5Q8NDF8 572 aaKnown RBP16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 OR8S1Q8NH09 359 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 OTOSQ8NHW6 89 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 THEM6Q8WUY1 208 aa16.05■□□□□ 0.16
SMARCB1-204ENST00000407422 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 hCG_1807616A0A1W2PRN6 198 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 TNFRSF13BO14836 293 aaPredicted RBP16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 DNAJC8O75937 253 aaPredicted RBP16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 APOC1P02654 83 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 HMGN1P05114 100 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 LYNP07948 512 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 ANXA8P13928 327 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 EGR1P18146 543 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 NAA10P41227 235 aaPredicted RBP16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 GSK3AP49840 483 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 POU4F2Q12837 409 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 RHOUQ7L0Q8 258 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 C11orf53Q8IXP5 236 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 OR52H1Q8NGJ2 320 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 TECTBQ96PL2 329 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 MS4A7Q9GZW8 240 aaPredicted RBP16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 OR10A2Q9H208 303 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 RASSF4Q9H2L5 321 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 YY1AP1Q9H869 796 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 SP140LQ9H930 580 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 C14orf119Q9NWQ9 140 aa16.04■□□□□ 0.16
SMARCB1-204ENST00000407422 TRAV40A0A0B4J280 105 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 OOEPA6NGQ2 149 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 DNAJC9-AS1A6NH13 148 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 PRODHO43272 600 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 LHBP01229 141 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 FAM90A1Q86YD7 464 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 PGAM5Q96HS1 289 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 SMURF1Q9HCE7 757 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 RHBDD3Q9Y3P4 386 aa16.03■□□□□ 0.16
SMARCB1-204ENST00000407422 IGHV3OR15-7A0A075B7D8 119 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 TRAV38-1A0A0B4J264 116 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 ADAM20O43506 726 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 FCN3O75636 299 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 PLATP00750 562 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 GYPAP02724 150 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 SLC2A5P22732 501 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 HCCSP53701 268 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 FGF12P61328 243 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 MZT1Q08AG7 82 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 KCNJ8Q15842 424 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 ZNF454Q8N9F8 522 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 CADM1Q9BY67 442 aaKnown RBP16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 SLC25A19Q9HC21 320 aa16.02■□□□□ 0.16
SMARCB1-204ENST00000407422 GSC2O15499 205 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 TIPRLO75663 272 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 PRTN3P24158 256 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 RPS7P62081 194 aaKnown RBP16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 CSNK2BP67870 215 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 BAMBIQ13145 260 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 C3orf56Q8N813 242 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 OR1M1Q8NGA1 313 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 PAPOLGQ9BWT3 736 aaKnown RBP16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 ERVK-18Q9QC07 812 aa16.01■□□□□ 0.15
SMARCB1-204ENST00000407422 CFL1P23528 166 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms