RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 RRP8O43159 456 aaKnown RBP2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 CCNKO75909 580 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 SEMA3DO95025 777 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 YIF1AO95070 293 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 PRB2P02812 416 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 PSMC3P17980 439 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 NPY1RP25929 384 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 PFN2P35080 140 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 TALDO1P37837 337 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 MYCNOSP40205 109 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 GFERP55789 205 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 TAS2R31P59538 309 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 YWHAEP62258 255 aaKnown RBP2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 CRADDP78560 199 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 UBE2SQ16763 222 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 CHRFAM7AQ494W8 412 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 WDR82Q6UXN9 313 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 SLC16A13Q7RTY0 426 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 RAB43Q86YS6 212 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 IQCF2Q8IXL9 164 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 ARHGAP18Q8N392 663 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 ITFG1Q8TB96 612 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 ASZ1Q8WWH4 475 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 ESR2Q92731 530 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 DEFB129Q9H1M3 183 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF442Q9H7R0 627 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 RBFOX1Q9NWB1 397 aaKnown RBP2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNHIT6Q9NWK9 470 aaKnown RBP2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 TMEM14AQ9Y6G1 99 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 PCM1Q15154 2024 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 GSTTP1A0A1W2PQM5 241 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 CENPXA8MT69 81 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 PDZK1P1A8MUH7 402 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 RSPH10B2B2RC85 870 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 SLC22A5O76082 557 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 VAMP5O95183 116 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 DCNP07585 359 aaKnown RBP2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 LINC00869P0C866 280 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 RSPH10BP0C881 870 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 RAB5AP20339 215 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 CD9P21926 228 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 CCNOP22674 350 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 GPR4P46093 362 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 UBE2E1P51965 193 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 TNNC1P63316 161 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 EIF4EBP1Q13541 118 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 TFDP2Q14188 446 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 ABCA11PQ4W5N1 156 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 OR2T5Q6IEZ7 315 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 FAM71E1Q6IPT2 247 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 ST13P4Q8IZP2 240 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 SYCE1Q8N0S2 351 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 WDR31Q8NA23 367 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 OR2T29Q8NH02 315 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 NDNFQ8TB73 568 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 TFGQ92734 400 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 HAUS1Q96CS2 278 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 L3HYPDHQ96EM0 354 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 NARS2Q96I59 477 aaKnown RBP2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 UBE2E2Q96LR5 201 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 CHID1Q9BWS9 393 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 PRRG3Q9BZD7 231 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 CD209Q9NNX6 404 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 FBXO6Q9NRD1 293 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 DDX19AQ9NUU7 478 aaKnown RBP2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 NECAP2Q9NVZ3 263 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 ADA2Q9NZK5 511 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 OPN4Q9UHM6 478 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF835Q9Y2P0 537 aa2.31□□□□□ -2.04
HMGB1P17-201ENST00000403495 H3BN98 237 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 SOCS1O15524 211 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 ETHE1O95571 254 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 IGLV3-25P01717 112 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 HLA-DQB1P01920 261 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 GLAP06280 429 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 THRAP10827 490 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 MOBPQ13875 183 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 GPR176Q14439 515 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 C5orf64Q2M2E5 130 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 RNASE13Q5GAN3 156 aaKnown RBP2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 TPRG1LQ5T0D9 272 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZFP1Q6P2D0 407 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 DEGS2Q6QHC5 323 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 ASCL4Q6XD76 172 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 SLC35D2Q76EJ3 337 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF709Q8N972 641 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 GATSQ8NAP1 163 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 OR1J4Q8NGS1 313 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF461Q8TAF7 563 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 RXFP4Q8TDU9 374 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 RXFP2Q8WXD0 754 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 FAM131CQ96AQ9 280 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 BTN2A3PQ96KV6 586 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 C18orf15Q96N68 181 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 GABRG3Q99928 467 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 KCNS3Q9BQ31 491 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 AGMATQ9BSE5 352 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 HINT2Q9BX68 163 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 CHRNA10Q9GZZ6 450 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms