RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ZNF786Q8N393 782 aa14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 ZNF540Q8NDQ6 660 aa14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 YIPF5Q969M3 257 aa14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 PPP1R3EQ9H7J1 279 aa14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 TREM2Q9NZC2 230 aa14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 CNOT2Q9NZN8 540 aaKnown RBP14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 MRPL15Q9P015 296 aaKnown RBP14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 ZNF391Q9UJN7 358 aa14.59□□□□□ -0.07
PTCHD3P3-201ENST00000403073 AKAP9Q99996 3911 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 IGHV4-30-2A0A087WSY4 118 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 IGHV3-64DA0A0J9YX35 117 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 A0A1B0GTI1 187 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 A0A1B0GWJ7 208 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 ANKRD30BLA7E2S9 258 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 PTGES3LE9PB15 166 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 E9PI62 339 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 F5H5P2 479 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 SLC1A7O00341 560 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CD55P08174 381 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MYL12AP19105 171 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 TNFSF4P23510 183 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 RBMXP38159 391 aaKnown RBP14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 KIR3DL2P43630 455 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 PDLIM4P50479 330 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 DSCR9P59020 149 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 NANOS3P60323 173 aaKnown RBP14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CSNK2BP67870 215 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 HNRNPA0Q13151 305 aaKnown RBP14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 OR8B8Q15620 311 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 OR2G6Q5TZ20 316 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 TGIF2LYQ8IUE0 185 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 STX19Q8N4C7 294 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 OR2G2Q8NGZ5 317 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 FAM168AQ92567 244 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 RDH5Q92781 318 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 DVL3Q92997 716 aaPredicted RBP14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MYCBPQ99417 103 aaPredicted RBP14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 EGLN1Q9GZT9 426 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 SAP30LQ9HAJ7 183 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 FKBP14Q9NWM8 211 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 FRRS1LQ9P0K9 344 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 EXOSC1Q9Y3B2 195 aaKnown RBP14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 RHBDD3Q9Y3P4 386 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CACNG2Q9Y698 323 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 USF3Q68DE3 2245 aa14.58□□□□□ -0.08
PTCHD3P3-201ENST00000403073 IGHV1-69-2A0A0G2JMI3 117 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 LOC390937A0A1W2PQ73 354 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 H3BSH0 61 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 HTR1AP08908 422 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 C21orf33P30042 268 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CRYBB2P43320 205 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 OR8G1Q15617 311 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 FDX2Q6P4F2 183 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 RDH10Q8IZV5 341 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CSNK2A3Q8NEV1 391 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 C10orf105Q8TEF2 133 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 ITLN1Q8WWA0 313 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 SGCDQ92629 289 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 OR2V2Q96R30 315 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MYOZ1Q9NP98 299 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CHCHD3Q9NX63 227 aaKnown RBP14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 SCN3BQ9NY72 215 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 IL19Q9UHD0 177 aa14.57□□□□□ -0.08
PTCHD3P3-201ENST00000403073 GMDSO60547 372 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MAP2K3P46734 347 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 GTF2A1P52655 376 aaPredicted RBP14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 GBX2P52951 348 aaPredicted RBP14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MRPS11P82912 194 aaKnown RBP14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 TMPRSS11AQ6ZMR5 421 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 EGFL6Q8IUX8 553 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 KLHL36Q8N4N3 616 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 PLPP7Q8NBV4 271 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 SEMA6DQ8NFY4 1073 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 GATAD2BQ8WXI9 593 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 PIGCQ92535 297 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MEGF10Q96KG7 1140 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 ADAT1Q9BUB4 502 aaKnown RBP14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 SLC22A4Q9H015 551 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 PAK1IP1Q9NWT1 392 aaPredicted RBP14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 UBAP1Q9NZ09 502 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 ERVK-18Q9QC07 812 aa14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CAB39Q9Y376 341 aaPredicted RBP14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 PRRC2AP48634 2157 aaKnown RBP14.56□□□□□ -0.08
PTCHD3P3-201ENST00000403073 ZNF850A8MQ14 1090 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 RNF223E7ERA6 249 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 DENRO43583 198 aaKnown RBP14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 RP2O75695 350 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CDK1P06493 297 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CSF3P09919 207 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 ACHEP22303 614 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 SRP9P49458 86 aaKnown RBP14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CCR9P51686 369 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 RIPPLY1Q0D2K3 151 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MAB21L1Q13394 359 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 MED21Q13503 144 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 ALKBH1Q13686 389 aaKnown RBP14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 KLBQ86Z14 1044 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CIARTQ8N365 385 aaPredicted RBP14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 OR14K1Q8NGZ2 314 aa14.55□□□□□ -0.08
PTCHD3P3-201ENST00000403073 CCL17Q92583 94 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms