RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 SLC22A24Q8N4F4 322 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 RPRMLQ8N4K4 120 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 OR2G2Q8NGZ5 317 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 GPR148Q8TDV2 347 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 MARVELD3Q96A59 401 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 DLL4Q9NR61 685 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF835Q9Y2P0 537 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 SSNA1O43805 119 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 NOS1APO75052 506 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 TOXO94900 526 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 CXCL3P19876 107 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 RIDAP52758 137 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 OR7E24Q6IFN5 339 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 TEX261Q6UWH6 196 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 TFAP2EQ6VUC0 442 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF813Q6ZN06 617 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 DOLPP1Q86YN1 238 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 OR10S1Q8NGN2 331 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 OR6K3Q8NGY3 331 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 LRP12Q9Y561 859 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 U3KQ87 197 aa16.91■□□□□ 0.3
PDLIM2-204ENST00000397760 IL2RAP01589 272 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 IL5P05113 134 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 CST2P09228 141 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 H2BFMP0C1H6 154 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 EDN3P14138 238 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 TIMP3P35625 211 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 RBPJQ06330 500 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 NRN1LQ496H8 165 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 VWA1Q6PCB0 445 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 DEGS2Q6QHC5 323 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 KLHL24Q6TFL4 600 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 PCSK4Q6UW60 755 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 SPICQ8N5J4 248 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 GJC3Q8NFK1 279 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 SORCS2Q96PQ0 1159 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 ZNF436Q9C0F3 470 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 TAS2R8Q9NYW2 309 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 SVILO95425 2214 aa16.9■□□□□ 0.3
PDLIM2-204ENST00000397760 LINC00862A6NCI5 91 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 FARS2O95363 451 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 TMIGD3P0DMS9 266 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 FAUP35544 74 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 OR3A3P47888 321 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 IZUMO1Q8IYV9 350 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 OR8H1Q8NGG4 311 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 FBXO17Q96EF6 278 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 NPDC1Q9NQX5 325 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 STEAP1Q9UHE8 339 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 PHF3Q92576 2039 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 ANXA2P2A6NMY6 339 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 SNRPGP15A8MWD9 76 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 XRCC3O43542 346 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 CRHP06850 196 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 ANXA2P07355 339 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 ADRA2CP18825 462 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 C4BPBP20851 252 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 DNASE1P24855 282 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 CDK2P24941 298 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 MPGP29372 298 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 TAS2R20P59543 309 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 ESCO2Q56NI9 601 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 SLC16A14Q7RTX9 510 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 OR11H4Q8NGC9 324 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 GPN1Q9HCN4 374 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 PNRC2Q9NPJ4 139 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 SLC17A5Q9NRA2 495 aa16.89■□□□□ 0.29
PDLIM2-204ENST00000397760 ZNF878C9JN71 531 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 GMDSO60547 372 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 TNFSF13O75888 250 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 SLC22A5O76082 557 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 HIST1H3AP68431 136 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 EIF2S3LQ2VIR3 472 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 HIST2H3PS2Q5TEC6 136 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 GLDNQ6ZMI3 551 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 HIST2H3AQ71DI3 136 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 RHOUQ7L0Q8 258 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 ZNF627Q7L945 461 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 SKA3Q8IX90 412 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 ZNF676Q8N7Q3 588 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 ZNF680Q8NEM1 530 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 C4orf45Q96LM5 186 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 HEXA-AS1Q9H8Q6 139 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 PLSCR4Q9NRQ2 329 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 TINAGQ9UJW2 476 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 AUP1Q9Y679 476 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 GTF3C1Q12789 2109 aa16.88■□□□□ 0.29
PDLIM2-204ENST00000397760 GLI4P10075 376 aa16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 SSBP1Q04837 148 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 TAF13Q15543 124 aa16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 NAXEQ8NCW5 288 aa16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 DACT3Q96B18 629 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 ORAI1Q96D31 301 aa16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 STARD4Q96DR4 205 aa16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 MED12LQ86YW9 2145 aa16.87■□□□□ 0.29
PDLIM2-204ENST00000397760 A0A096LPE4 126 aa16.86■□□□□ 0.29
PDLIM2-204ENST00000397760 A0A1W2PPZ6 126 aa16.86■□□□□ 0.29
PDLIM2-204ENST00000397760 NDUFB6O95139 128 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms