RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ADAM5Q6NVV9 412 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 FAM122BQ7Z309 247 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 BCDIN3DQ7Z5W3 292 aaKnown RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 RTN4RL1Q86UN2 441 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 UBALD1Q8TB05 177 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ASB5Q8WWX0 329 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 MS4A7Q9GZW8 240 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 GABARAPL1Q9H0R8 117 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 SLC26A1Q9H2B4 701 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 LPAR2Q9HBW0 351 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ZNF586Q9NXT0 402 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 GDF2Q9UK05 429 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 C3orf80F5H4A9 247 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ATXN7O15265 892 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 LYZL6O75951 148 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 NGFP01138 241 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 SCG5P05408 212 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 GPX2P18283 190 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 POU3F3P20264 500 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 DAPP51397 102 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 SSPNQ14714 243 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ZNF239Q16600 458 aaKnown RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 ETFRF1Q6IPR1 90 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 DHRS4L2Q6PKH6 230 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 LRRC61Q9BV99 259 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 TMUB1Q9BVT8 246 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 MAGT1Q9H0U3 335 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 HEXA-AS1Q9H8Q6 139 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 FRG2CA6NGY1 282 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 G3V3Q6 166 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 TMPRSS11DO60235 418 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 JTBO76095 146 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 SIX6O95475 246 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 RRASP10301 218 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 NME1P15531 152 aaKnown RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 CD200P41217 278 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 CDC34P49427 236 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 DIO1P49895 249 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ASCL1P50553 236 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 GPM6AP51674 278 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 HAGHQ16775 308 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 NRARPQ7Z6K4 114 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 LAX1Q8IWV1 398 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 OR4C3Q8NH37 302 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 GPX8Q8TED1 209 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 RTN4IP1Q8WWV3 396 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 GNRHR2Q96P88 292 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 CHST6Q9GZX3 395 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 PBOV1Q9GZY1 135 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 WBP1LQ9NX94 342 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 FZR1Q9UM11 496 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 TMEM131LA2VDJ0 1609 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 POLEQ07864 2286 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 TRDV1A0A1B0GX56 115 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 CCL21O00585 134 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 FCMRO60667 390 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 HSBP1O75506 76 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 AQP8O94778 261 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ALPLP05186 524 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 FAHP16930 419 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 S100A11P31949 105 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 FAM3AP98173 230 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ALKAL1Q6UXT8 129 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ZNF574Q6ZN55 896 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 CCDC190Q86UF4 302 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ENTHD1Q8IYW4 607 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ADPRHL1Q8NDY3 354 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 OR52I1Q8NGK6 324 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 OR2I1PQ8NGU4 316 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 RHOXF1Q8NHV9 184 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 GPR119Q8TDV5 335 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 RASL11BQ9BPW5 248 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 NIPSNAP1Q9BPW8 284 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 DCAF16Q9NXF7 216 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 PSORS1C1Q9UIG5 152 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 SPAARA0A1B0GVQ0 90 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ZNF701M0R085 212 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 OR2F2O95006 317 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 MGMTP16455 207 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ZNF17P17021 662 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 PI3P19957 117 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 KIR2DL1P43626 348 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 KIR2DL2P43627 348 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 AQP6Q13520 282 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 RSPO2Q6UXX9 243 aaPredicted RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 GTF2H5Q6ZYL4 71 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 Q7L0L9 218 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 PTRH1Q86Y79 214 aaKnown RBP6.49□□□□□ -1.37
UPF2-203ENST00000397053 OR8B3Q8NGG8 313 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 OR1F12Q8NHA8 337 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 NUDCD2Q8WVJ2 157 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ISL2Q96A47 359 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 OR8B2Q96RD0 313 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 UCK1Q9HA47 277 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 TAAR3PQ9P1P4 343 aa6.49□□□□□ -1.37
UPF2-203ENST00000397053 ZNF354AO60765 605 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 LRP3O75074 770 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 CEACAM5P06731 702 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 CCR6P51684 374 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 SOX8P57073 446 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms