RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 BLACEA4D250 179 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 RAB27BO00194 218 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 MT-ATP6P00846 226 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 PRSS54Q6PEW0 395 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 ADAD2Q8NCV1 583 aaKnown RBP12.8□□□□□ -0.36
RTF1-201ENST00000389629 POM121Q96HA1 1249 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 METTL9Q9H1A3 318 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 DKKL1Q9UK85 242 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 PATJQ8NI35 1801 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 PPP5D1E7EU14 171 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 BPNT1O95861 308 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 HSD17B7P56937 341 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 TAF9Q16594 264 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 LINC00469Q8N7U9 141 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 INTS12Q96CB8 462 aaKnown RBP12.8□□□□□ -0.36
RTF1-201ENST00000389629 PIPOXQ9P0Z9 390 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 A0A087X0M5 115 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 A0A1B0GX30 115 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 SULT2B1O00204 365 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 MYOGP15173 224 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
RTF1-201ENST00000389629 DCAF7P61962 342 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 PABPC1L2AQ5JQF8 200 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 CBLN3Q6UW01 205 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 GPR119Q8TDV5 335 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 SGK3Q96BR1 496 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 NKX2-4Q9H2Z4 354 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 OPA3Q9H6K4 179 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 PLEKHA2Q9HB19 425 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 GPR84Q9NQS5 396 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 TBX21Q9UL17 535 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 PIN1P1O15428 100 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 OR2A4O95047 310 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 TK1P04183 234 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 THY1P04216 161 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 CD1CP29017 333 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 HFEQ30201 348 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 PLXDC2Q6UX71 529 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 TAAR8Q969N4 342 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
RTF1-201ENST00000389629 EFNA3P52797 238 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 YPEL5P62699 121 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 GABREP78334 506 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
RTF1-201ENST00000389629 NKAIN2Q5VXU1 208 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 TSPAN32Q96QS1 320 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 CCNL2Q96S94 520 aaPredicted RBP12.79□□□□□ -0.36
RTF1-201ENST00000389629 SLC39A9Q9NUM3 307 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 OR4C45A6NMZ5 311 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 ZNF749O43361 778 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 DFFBO76075 338 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 DDAH2O95865 285 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 TBPP20226 339 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 PIGPP57054 158 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 PIGCQ92535 297 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 SLC35B3Q9H1N7 401 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 STRAPQ9Y3F4 350 aaKnown RBP12.79□□□□□ -0.36
RTF1-201ENST00000389629 RCC1P18754 421 aaPredicted RBP12.79□□□□□ -0.36
RTF1-201ENST00000389629 ELLP55199 621 aaPredicted RBP12.79□□□□□ -0.36
RTF1-201ENST00000389629 TMEM33P57088 247 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 TMEM41BQ5BJD5 291 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 PLK3Q9H4B4 646 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 SLC5A6Q9Y289 635 aa12.79□□□□□ -0.36
RTF1-201ENST00000389629 DUSP1P28562 367 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 CSNK1A1P48729 337 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 SULT1A1P50225 295 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 MLF1P58340 268 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 PSG6Q00889 435 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 RTL6Q6ICC9 239 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 TSLPQ969D9 159 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 SAT2Q96F10 170 aaPredicted RBP12.78□□□□□ -0.36
RTF1-201ENST00000389629 ZNF426Q9BUY5 554 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 SLC17A5Q9NRA2 495 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 SCN2AQ99250 2005 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 A0A0G2JK05 382 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 OR6C6A6NF89 314 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 MPTX1A8MV57 137 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 GPR37O15354 613 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 SSSCA1O60232 199 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 CST7O76096 145 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 MBP02144 154 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 NPSR1Q6W5P4 371 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 ZNF429Q86V71 674 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 VSIG4Q9Y279 399 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 HSPB2A8KAH6 182 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 DUX1O43812 170 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 PEBP1P30086 187 aaKnown RBP12.78□□□□□ -0.36
RTF1-201ENST00000389629 HSPB2Q16082 182 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 OR2B11Q5JQS5 317 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 FAM185AQ8N0U4 392 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 S1PR5Q9H228 398 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 TXNIPQ9H3M7 391 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 ZCCHC4Q9H5U6 513 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 TSC2P49815 1807 aa12.78□□□□□ -0.36
RTF1-201ENST00000389629 FAM221BA6H8Z2 402 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms