RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CCDC54Q8NEL0 328 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 SSC4DQ8WTU2 575 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 FAM46BQ96A09 425 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 PRDM14Q9GZV8 571 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 NUDT15Q9NV35 164 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 MTFP1Q9UDX5 166 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 KLK13Q9UKR3 277 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 SVILO95425 2214 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 GMDSO60547 372 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 HLA-DMAP28067 261 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 OR3A4PP47883 348 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 BTG1P62324 171 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 ZADH2Q8N4Q0 377 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 OR6F1Q8NGZ6 308 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 PP6455Q8WZ26 134 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 C10orf35Q96D05 121 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 COPZ2Q9P299 210 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 NUBP2Q9Y5Y2 271 aa17.3■□□□□ 0.36
PDLIM5-205ENST00000380180 A0A0A6YYH2 397 aa17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 METTL21EPA6NDL7 271 aa17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 A6NJ64 397 aa17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 HLA-HP01893 362 aa17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 SFRP4Q6FHJ7 346 aaPredicted RBP17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 GLIPR1L1Q6UWM5 242 aa17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 CHST5Q9GZS9 411 aa17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 MRPS28Q9Y2Q9 187 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-205ENST00000380180 MEIS3P1A6NDR6 274 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 FCGR2AP12318 317 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 PRF1P14222 555 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 ACKR3P25106 362 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 UTS2BQ765I0 119 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 ZNF101Q8IZC7 436 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 ACBD4Q8NC06 268 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 SEMA6DQ8NFY4 1073 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 NPRL2Q8WTW4 380 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 GPER1Q99527 375 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 GP6Q9HCN6 339 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 ZNF503-AS2A6NEH8 195 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 NAP1L6A6NFF2 107 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 ALX3O95076 343 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 TRAPPC2P0DI81 140 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 TRAPPC2BP0DI82 140 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 KISS1Q15726 138 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 PCGF3Q3KNV8 242 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 CRIP3Q6Q6R5 217 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 P4HA3Q7Z4N8 544 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 RNF170Q96K19 258 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 C1orf147Q96MC9 270 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 ZMAT3Q9HA38 289 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 B3GNT2Q9NY97 397 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 FBLN5Q9UBX5 448 aa17.28■□□□□ 0.36
PDLIM5-205ENST00000380180 TMEM14DPA8MWL7 114 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 RAB27BO00194 218 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 DLL1O00548 723 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 SPINK2P20155 84 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 PRSS12P56730 875 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 TNK1Q13470 666 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 TBRG1Q3YBR2 411 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 FBXW9Q5XUX1 488 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 IGFL3Q6UXB1 125 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 GPX8Q8TED1 209 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 GMPPAQ96IJ6 420 aaPredicted RBP17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 CLCF1Q9UBD9 225 aa17.27■□□□□ 0.36
PDLIM5-205ENST00000380180 LOC100509620A0A075B734 347 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 DHRS7CA6NNS2 312 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 AQP7O14520 342 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 DHFRP00374 187 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 SDHBP21912 280 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 ZNF169Q14929 603 aaPredicted RBP17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 OLFML2AQ68BL7 652 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 RAB12Q6IQ22 244 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 FAAP20Q6NZ36 180 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 BTN2A1Q7KYR7 527 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 SEH1LQ96EE3 360 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 ST6GAL2Q96JF0 529 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 TAAR6Q96RI8 345 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 MCUBQ9NWR8 336 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 ATPIF1Q9UII2 106 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 ELF5Q9UKW6 265 aaPredicted RBP17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 WIPF3A6NGB9 483 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 A8MV72 311 aaPredicted RBP17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 CD79AP11912 226 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 RIPPLY1Q0D2K3 151 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 TMEM104Q8NE00 496 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 TRIB1Q96RU8 372 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 C1QTNF5Q9BXJ0 243 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 NOX3Q9HBY0 568 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 TAS2R8Q9NYW2 309 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 ZNF391Q9UJN7 358 aa17.26■□□□□ 0.35
PDLIM5-205ENST00000380180 SULT1C2O00338 296 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 EDN3P14138 238 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 OR3A2P47893 321 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 RAB1AP62820 205 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 ZNF92Q03936 586 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 FOXC1Q12948 553 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 OR2W3Q7Z3T1 314 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 OR5D18Q8NGL1 313 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 CMBLQ96DG6 245 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 RGCCQ9H4X1 137 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms