RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 DUSP8Q13202 625 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 DEFB134Q4QY38 66 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 PYCR3Q53H96 274 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 GLIPR1L1Q6UWM5 242 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 EDARADDQ8WWZ3 215 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 FAM198AQ9UFP1 575 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 PIAS3Q9Y6X2 628 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 ATRNO75882 1429 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 SLC38A8A6NNN8 435 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 SNRPNP63162 240 aaKnown RBP7.97□□□□□ -1.13
LIG3-202ENST00000378526 FPGSQ05932 587 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 RANBP10Q6VN20 620 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 PLPP7Q8NBV4 271 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 OR5A1Q8NGJ0 315 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 TFAP2BQ92481 460 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 OPN4Q9UHM6 478 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 SALL3Q9BXA9 1300 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 NAV1Q8NEY1 1877 aa7.97□□□□□ -1.13
LIG3-202ENST00000378526 ZNF608Q9ULD9 1512 aaPredicted RBP7.96□□□□□ -1.13
LIG3-202ENST00000378526 HOXA6P31267 233 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 KIR2DL3P43628 341 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 YBX1P67809 324 aaKnown RBP7.96□□□□□ -1.13
LIG3-202ENST00000378526 DGCR2P98153 550 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 ANKRD55Q3KP44 614 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 PRRT3Q5FWE3 981 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 MDGA1Q8NFP4 955 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 FUBP1Q96AE4 644 aaKnown RBP7.96□□□□□ -1.13
LIG3-202ENST00000378526 GGACTQ9BVM4 153 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 RAB33BQ9H082 229 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 ERCC6L2Q5T890 1561 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 MEGF6O75095 1541 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 COCHO43405 550 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 DOK2O60496 412 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 SLCO2B1O94956 709 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 S1PR4O95977 384 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 OR8G3PP0DMU2 310 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 CAMPP49913 170 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 SYPL2Q5VXT5 272 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 SMIM19Q96E16 107 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 ZIC5Q96T25 663 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 HRASLS2Q9NWW9 162 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 PLAGL1Q9UM63 463 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 HMX2A2RU54 273 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 UBE2L3P68036 154 aaKnown RBP7.96□□□□□ -1.13
LIG3-202ENST00000378526 SRSF5Q13243 272 aaKnown RBP7.96□□□□□ -1.13
LIG3-202ENST00000378526 LGALSLQ3ZCW2 172 aaPredicted RBP7.96□□□□□ -1.13
LIG3-202ENST00000378526 DOK3Q7L591 496 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 DUSP18Q8NEJ0 188 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 ACVR1CQ8NER5 493 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 STXBP6Q8NFX7 210 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 OR51H1Q8NH63 302 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 SH2D2AQ9NP31 389 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 MRPL16Q9NX20 251 aaKnown RBP7.96□□□□□ -1.13
LIG3-202ENST00000378526 MCM3APO60318 1980 aa7.96□□□□□ -1.13
LIG3-202ENST00000378526 ANKRD36CQ5JPF3 1778 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 C7orf77A4D0Y5 90 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 RBM11P57052 281 aaKnown RBP7.96□□□□□ -1.14
LIG3-202ENST00000378526 DCAF7P61962 342 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 RCL1Q9Y2P8 373 aaKnown RBP7.96□□□□□ -1.14
LIG3-202ENST00000378526 SMIM28A0A1B0GU29 152 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 IFITM5A6NNB3 132 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 SP1P08047 785 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 CDKN2DP55273 166 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 GJC3Q8NFK1 279 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 OR1P1Q8NH06 330 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 SLAMF6Q96DU3 332 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 SPACA9Q96E40 222 aaPredicted RBP7.96□□□□□ -1.14
LIG3-202ENST00000378526 ZMAT3Q9HA38 289 aaKnown RBP7.96□□□□□ -1.14
LIG3-202ENST00000378526 PI4KAP42356 2102 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 ARG1P05089 322 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 FKBP2P26885 142 aaKnown RBP7.96□□□□□ -1.14
LIG3-202ENST00000378526 PLA1AQ53H76 456 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 OR5M10Q6IEU7 315 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 FAM71F2Q6NXP2 309 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 ISCA2Q86U28 154 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 C5orf17Q8NAS9 161 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 PRSS16Q9NQE7 514 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 RNF181Q9P0P0 153 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 ATRNL1Q5VV63 1379 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 PAQR6Q6TCH4 344 aa7.96□□□□□ -1.14
LIG3-202ENST00000378526 GOT1L1Q8NHS2 421 aaPredicted RBP7.96□□□□□ -1.14
LIG3-202ENST00000378526 TIMM8AO60220 97 aaPredicted RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 HLA-DRB1P01911 266 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 F11P03951 625 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 MFAP5Q13361 173 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 TPGS2Q68CL5 300 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 WDFY1Q8IWB7 410 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 DCAF4L2Q8NA75 395 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 PRRX2Q99811 253 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 M0R296 226 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 SH2D1BO14796 132 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 P01737 135 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 FPR2P25090 351 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 SCAND1P57086 179 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 TBC1D26Q86UD7 250 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 CBLN2Q8IUK8 224 aa7.95□□□□□ -1.14
LIG3-202ENST00000378526 CPEB3Q8NE35 698 aaKnown RBP7.95□□□□□ -1.14
LIG3-202ENST00000378526 OR10AD1Q8NGE0 317 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms