RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 KLF14Q8TD94 323 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 THRSPQ92748 146 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 MARS2Q96GW9 593 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 RBM38Q9H0Z9 239 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 RSL24D1Q9UHA3 163 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 V9GYS6 101 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 LOC390937A0A1W2PQ73 354 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 A6NHS1 94 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 SIAH2O43255 324 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 ARL6IP5O75915 188 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 GALP22466 123 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 TUBG1P23258 451 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 ACKR3P25106 362 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 FGF9P31371 208 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-203ENST00000377344 GLRXP35754 106 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 MPV17P39210 176 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 NKX6-1P78426 367 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-203ENST00000377344 HSD17B12Q53GQ0 312 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 OR2T2Q6IF00 324 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 FBXW12Q6X9E4 464 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 CCDC54Q8NEL0 328 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 KBTBD8Q8NFY9 601 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 OR56B2PQ8NGI1 322 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-203ENST00000377344 FAM222BQ8WU58 562 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 ADAT3Q96EY9 351 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-203ENST00000377344 KCTD7Q96MP8 289 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 PPIL3Q9H2H8 161 aaKnown RBP11.13□□□□□ -0.63
CBWD3-203ENST00000377344 TUBG2Q9NRH3 451 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 CA10Q9NS85 328 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 CKLFQ9UBR5 152 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 DUSP13Q9UII6 198 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 RNF115Q9Y4L5 304 aa11.13□□□□□ -0.63
CBWD3-203ENST00000377344 DEFB108AA8MXU0 73 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 H3BMQ9 156 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 UCHL1P09936 223 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 RAC2P15153 192 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 IGFBP2P18065 325 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 MYL9P24844 172 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 THBS4P35443 961 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 TNK1Q13470 666 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 OR8B8Q15620 311 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 FOXB2Q5VYV0 432 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 UNQ9370/PRO34162Q6UXP9 181 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 SERPINA12Q8IW75 414 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 OR5AS1Q8N127 324 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 NUP37Q8NFH4 326 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 C12orf43Q96C57 262 aaKnown RBP11.12□□□□□ -0.63
CBWD3-203ENST00000377344 DGCR14Q96DF8 476 aaKnown RBP11.12□□□□□ -0.63
CBWD3-203ENST00000377344 TCF7L1Q9HCS4 588 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 TRBV5-7A0A0A0MS05 114 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 CD300LBA8K4G0 201 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 SHISA9B4DS77 424 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 PIN1P1O15428 100 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 PLAUP00749 431 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 RAF1P04049 648 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 OCMP0CE72 109 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-203ENST00000377344 MXD1Q05195 221 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 PSG7Q13046 419 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 FTMTQ8N4E7 242 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 OR5D14Q8NGL3 314 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 SYNPRQ8TBG9 265 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 TMEM171Q8WVE6 324 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 PIGCQ92535 297 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 PHYHIPQ92561 330 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 HAVCR1Q96D42 359 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 SLITRK2Q9H156 845 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
CBWD3-203ENST00000377344 USP9XQ93008 2570 aaPredicted RBP11.11□□□□□ -0.63
CBWD3-203ENST00000377344 ANKHD1Q8IWZ3 2542 aaKnown RBP11.11□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF816-ZNF321PA0A0X1KG74 233 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 DHRS7CA6NNS2 312 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 TIMM8AO60220 97 aaPredicted RBP11.11□□□□□ -0.63
CBWD3-203ENST00000377344 MAS1P04201 325 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 SELEP16581 610 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 SRMP19623 302 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 DDOSTP39656 456 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 SERPINB10P48595 397 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 KLF3P57682 345 aaPredicted RBP11.11□□□□□ -0.63
CBWD3-203ENST00000377344 SELENOVP59797 346 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 PPP3R1P63098 170 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 ALKBH6Q3KRA9 238 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 DMRTC1Q5HYR2 192 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 MBNL2Q5VZF2 373 aaKnown RBP11.11□□□□□ -0.63
CBWD3-203ENST00000377344 Q6ZSR3 168 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 PARP16Q8N5Y8 322 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 CSNK2A3Q8NEV1 391 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 OR13C9Q8NGT0 318 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 NDNFQ8TB73 568 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 NEUROG1Q92886 237 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 BCL7BQ9BQE9 202 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 SYT3Q9BQG1 590 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
CBWD3-203ENST00000377344 RHBDD3Q9Y3P4 386 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 DOPEY1Q5JWR5 2465 aa11.11□□□□□ -0.63
CBWD3-203ENST00000377344 TRAV8-7A0A075B6U6 113 aa11.1□□□□□ -0.63
CBWD3-203ENST00000377344 SMIM30A4D0T7 59 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms