RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 MDGA2Q7Z553 956 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 PLPP5Q8NEB5 264 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 OR1P1Q8NH06 330 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 OR4X1Q8NH49 305 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SH3BGRL3Q9H299 93 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 MTHFD2LQ9H903 347 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 LUZP4Q9P127 313 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 RIF1Q5UIP0 2472 aaKnown RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SFT2D2O95562 160 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 FGF5P12034 268 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SERPINA2P20848 420 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 CEACAM8P31997 349 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 COA6Q5JTJ3 125 aaKnown RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 RTN4RL1Q86UN2 441 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 DCAF4L2Q8NA75 395 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 CDS1Q92903 461 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 WFDC1Q9HC57 220 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 GSKIPQ9P0R6 139 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 IFNL4K9M1U5 179 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF264O43296 627 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 CBR3O75828 277 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 CD82P27701 267 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 PRLHRP49683 370 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF260Q3ZCT1 412 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 PHF19Q5T6S3 580 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 TIPARPQ7Z3E1 657 aaKnown RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 HSD11B1LQ7Z5J1 315 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 OR52E1Q8NGJ3 308 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 ALKBH3Q96Q83 286 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 SERINC2Q96SA4 455 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 TPSD1Q9BZJ3 242 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 OR8D2Q9GZM6 311 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 DNAJC4Q9NNZ3 241 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 ADAP2Q9NPF8 381 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 TCFL5Q9UL49 500 aa8.51□□□□□ -1.05
SF3A3-201ENST00000373019 CHTOPQ9Y3Y2 248 aaKnown RBP8.51□□□□□ -1.05
SF3A3-201ENST00000373019 CACNA1CQ13936 2221 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 ABLIM3O94929 683 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 CST2P09228 141 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 NKAIN1Q4KMZ8 207 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 PRAMEF14Q5SWL7 426 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 GLYATL3Q5SZD4 288 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 OPN5Q6U736 354 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 Q6ZVL8 140 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 TRAPPC6BQ86SZ2 158 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF429Q86V71 674 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 NOXO1Q8NFA2 376 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 OR52N4Q8NGI2 321 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 CMBLQ96DG6 245 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 OR11A1Q9GZK7 315 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 SMDT1Q9H4I9 107 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 LRFN1Q9P244 771 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 PLAGL1Q9UM63 463 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 GPR132Q9UNW8 380 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 V9GYS6 101 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 DNAH14Q0VDD8 3507 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 A0A1W2PPQ1 181 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 C4orf51C9J302 202 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 NDUFS4O43181 175 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 DNAJB6O75190 326 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 SRP19P09132 144 aaKnown RBP8.5□□□□□ -1.05
SF3A3-201ENST00000373019 TACSTD2P09758 323 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 PET100P0DJ07 73 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 SUCLG1P53597 346 aaKnown RBP8.5□□□□□ -1.05
SF3A3-201ENST00000373019 COL10A1Q03692 680 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 TLE4Q04727 773 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 DUSP8Q13202 625 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 OR5I1Q13606 314 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 METRNLQ641Q3 311 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 SLC35D2Q76EJ3 337 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 RTN4RL2Q86UN3 420 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF676Q8N7Q3 588 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 A0A1W2PR48 441 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 LINC01553A4QN01 128 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 ELOA3DA6NLF2 546 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-201ENST00000373019 B4E171 279 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 LDB3O75112 727 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 PI3P19957 117 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 CCKBRP32239 447 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 MAPK8P45983 427 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 RND2P52198 227 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 PRPS1P60891 318 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 RND3P61587 244 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 ELOA3BQ3SY89 546 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 MRPL2Q5T653 305 aaKnown RBP8.5□□□□□ -1.05
SF3A3-201ENST00000373019 RSPO2Q6UXX9 243 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-201ENST00000373019 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
SF3A3-201ENST00000373019 ELOA3Q8NG57 546 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 OR2AP1Q8NGE2 309 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 METTL21AQ8WXB1 218 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 FAM122AQ96E09 287 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 TSSK2Q96PF2 358 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 GINS3Q9BRX5 216 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 NUDT9Q9BW91 350 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 PARD6GQ9BYG4 376 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-201ENST00000373019 WDR45Q9Y484 360 aa8.5□□□□□ -1.05
SF3A3-201ENST00000373019 TCRBV21S2A2A0A5A6 115 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
SF3A3-201ENST00000373019 TRDCB7Z8K6 153 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms