RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 BTNL3Q6UXE8 466 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZNF826PQ6ZT77 177 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PARP8Q8N3A8 854 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR52H1Q8NGJ2 320 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OTOSQ8NHW6 89 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GCDHQ92947 438 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 REEP6Q96HR9 211 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 NUDT16L1Q9BRJ7 211 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PRDM13Q9H4Q3 707 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PPP1R3EQ9H7J1 279 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SP140LQ9H930 580 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C1orf123Q9NWV4 160 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 POMPQ9Y244 141 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SOX21Q9Y651 276 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TRRAPQ9Y4A5 3859 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PRR23D1E9PI22 279 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CLDN34H7C241 214 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PRODHO43272 600 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 NDUFA2O43678 99 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FKBP6O75344 327 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 HMGN1P05114 100 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PRR23D2P0DMB1 279 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ANXA8P13928 327 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 HSD11B1P28845 292 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR8B8Q15620 311 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DNAL1Q4LDG9 190 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SFRP4Q6FHJ7 346 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PLBD1Q6P4A8 553 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FAM57BQ71RH2 274 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 KRT74Q7RTS7 529 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FAM90A1Q86YD7 464 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CPOQ8IVL8 374 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TLNRD1Q9H1K6 362 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR51V1Q9H2C8 321 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SLC25A19Q9HC21 320 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C14orf119Q9NWQ9 140 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 KAAG1Q9UBP8 84 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DNAJB9Q9UBS3 223 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 N6AMT1Q9Y5N5 214 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TRAV38-1A0A0B4J264 116 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OOEPA6NGQ2 149 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DNAJC9-AS1A6NH13 148 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ANKRD30BLA7E2S9 258 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C3orf80F5H4A9 247 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GNGT2O14610 69 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GYG2O15488 501 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TBX1O43435 398 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SELENOFO60613 162 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ANXA2P07355 339 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GRPP07492 148 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 LYNP07948 512 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 HKR1P10072 659 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 MMP9P14780 707 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PAICSP22234 425 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CFL1P23528 166 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 POU1F1P28069 291 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CFHR2P36980 270 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GSK3AP49840 483 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CBX1P83916 185 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 MZT1Q08AG7 82 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FLOT2Q14254 428 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 KCNJ8Q15842 424 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 AWAT1Q58HT5 328 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SLC35D3Q5M8T2 416 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZNF454Q8N9F8 522 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 BBS1Q8NFJ9 593 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 BCAS4Q8TDM0 211 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 UTP4Q969X6 686 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 NRBF2Q96F24 287 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZMAT3Q9HA38 289 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 RNPEPL1Q9HAU8 725 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SMURF1Q9HCE7 757 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TRIM36Q9NQ86 728 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 KLHDC2Q9Y2U9 406 aa11.35□□□□□ -0.59
TNFRSF1A-202ENST00000366159 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ENSAO43768 121 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DNAJC8O75937 253 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 RNASE1P07998 156 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 H2BFMP0C1H6 154 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 EGR1P18146 543 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ALOX5APP20292 161 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ACKR3P25106 362 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FGF12P61328 243 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SLC9A3R2Q15599 337 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TIGD6Q17RP2 521 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C11orf91Q3C1V1 193 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FAM76BQ5HYJ3 339 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TMEM236Q5W0B7 351 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FAHD1Q6P587 224 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 WDR82Q6UXN9 313 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 RBMS3Q6XE24 437 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SPATA24Q86W54 205 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OTULINQ96BN8 352 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ITPKCQ96DU7 683 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 LYZL4Q96KX0 146 aa11.34□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR10A2Q9H208 303 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms