RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GAL3ST2Q9H3Q3 398 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 RCL1Q9Y2P8 373 aaKnown RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 SCN11AQ9UI33 1791 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 A0A0A6YYJ9 748 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 RFPL4AA6NLU0 287 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 RFPL4AL1F8VTS6 287 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 TMPRSS11DO60235 418 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 Q56UQ5 140 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 CORO6Q6QEF8 472 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 BTNL3Q6UXE8 466 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 SLC25A26Q70HW3 274 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 NUFIP2Q7Z417 695 aaKnown RBP5.84□□□□□ -1.48
UPF2-201ENST00000356352 CARFQ8N187 725 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 OR5D13Q8NGL4 314 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 RTN4IP1Q8WWV3 396 aaPredicted RBP5.84□□□□□ -1.48
UPF2-201ENST00000356352 OIT3Q8WWZ8 545 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 MRGPRX1Q96LB2 322 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 FOXB1Q99853 325 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 ADAT1Q9BUB4 502 aaKnown RBP5.84□□□□□ -1.48
UPF2-201ENST00000356352 ESRP2Q9H6T0 727 aaKnown RBP5.84□□□□□ -1.48
UPF2-201ENST00000356352 MAST2Q6P0Q8 1798 aa5.84□□□□□ -1.48
UPF2-201ENST00000356352 TRGV5A0A0B4J1U4 118 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 SOCS7O14512 581 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ADAM11O75078 769 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 AQP8O94778 261 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 CTSLP07711 333 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 SLC25A4P12235 298 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ZNF17P17021 662 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 BMP5P22003 454 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 FPR2P25090 351 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 OR2B8PP59922 312 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 FABP9Q0Z7S8 132 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 GTF2H5Q6ZYL4 71 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 BAP18Q8IXM2 172 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 CADM4Q8NFZ8 388 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 GPR32P1Q8NGA4 272 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 OR52N4Q8NGI2 321 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 OR2A1Q8NGT9 310 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 RPUSD4Q96CM3 377 aaKnown RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 PRRX2Q99811 253 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ONECUT1Q9UBC0 465 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 B9D1Q9UPM9 204 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 LSM2Q9Y333 95 aaKnown RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 TRBV5-4A0A0C4DH59 114 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 B4GALT1P15291 398 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 CEACAM3P40198 252 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 EMDP50402 254 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 GNG3P63215 75 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 FOXF1Q12946 379 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 IL11RAQ14626 422 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 OR1C1Q15619 314 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 PLAC9Q5JTB6 97 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 AHDC1Q5TGY3 1603 aaPredicted RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 JMJD6Q6NYC1 403 aaPredicted RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 UQCC3Q6UW78 93 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 LINC01465Q8N7H1 131 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 RNF2Q99496 336 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ARRDC1-AS1Q9H2J1 176 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 THYN1Q9P016 225 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 TOPAZ1Q8N9V7 1692 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 TEX50A0A1B0GTY4 177 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 TRIM77I1YAP6 450 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 UPK1AO00322 258 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 GABRB1P18505 474 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 FUT3P21217 361 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 PRRX1P54821 245 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 PPP1CBP62140 327 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 SNRPNP63162 240 aaKnown RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 DUSP2Q05923 314 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 MRPL58Q14197 206 aaKnown RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 MICBQ29980 383 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ZNF425Q6IV72 752 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ACSM5Q6NUN0 579 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 TMEM207Q6UWW9 146 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 GALNT16Q8N428 558 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ST8SIA2Q92186 375 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 C8orf44Q96CB5 159 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 TGIF2Q9GZN2 237 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ZDHHC11Q9H8X9 412 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 SSC5DA1L4H1 1573 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 MYH7P12883 1935 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 A0A1W2PN81 502 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ZC3H12DA2A288 527 aaKnown RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 METTL12A8MUP2 240 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 H0Y8X5 98 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 B3GALT4O96024 378 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 EPHA2P29317 976 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 CD80P33681 288 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 CHRNA7P36544 502 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 SLC25A1P53007 311 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 SCAND1P57086 179 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 BTG2P78543 158 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 CDC20Q12834 499 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ZNF766Q5HY98 468 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 ASTLQ6HA08 431 aaPredicted RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 ZNF574Q6ZN55 896 aaPredicted RBP5.83□□□□□ -1.48
UPF2-201ENST00000356352 ZNF561Q8N587 486 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 UQCC2Q9BRT2 126 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 LRFN3Q9BTN0 628 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 SLC45A2Q9UMX9 530 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms