RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 WDR86Q86TI4 376 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 KLBQ86Z14 1044 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 ERGIC1Q969X5 290 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 TEAD3Q99594 435 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 SLC6A7Q99884 636 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 OPA3Q9H6K4 179 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 PPIAL4AQ9Y536 164 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 FSTL3O95633 263 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 APOC1P02654 83 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 MRPL3P09001 348 aaKnown RBP12.05□□□□□ -0.48
HMGN3-202ENST00000344726 RPS2P15880 293 aaKnown RBP12.05□□□□□ -0.48
HMGN3-202ENST00000344726 ZNF12P17014 697 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 GSK3AP49840 483 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 HILS1P60008 231 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 ESRRGP62508 458 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 EFNB1P98172 346 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 GFOD2Q3B7J2 385 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 ESCO2Q56NI9 601 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 SLX4IPQ5VYV7 408 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 ZNF826PQ6ZT77 177 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 OR52H1Q8NGJ2 320 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 PGAM5Q96HS1 289 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 LYZL4Q96KX0 146 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 OR10A2Q9H208 303 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 ESM1Q9NQ30 184 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 KRT84Q9NSB2 600 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 MIOXQ9UGB7 285 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 COPS3Q9UNS2 423 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 LRCH1Q9Y2L9 728 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
HMGN3-202ENST00000344726 LRP12Q9Y561 859 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 INSIG2Q9Y5U4 225 aa12.05□□□□□ -0.48
HMGN3-202ENST00000344726 A0A0A6YYJ9 748 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 ZAR1LA6NP61 321 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 PSMD9O00233 223 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 IRF2P14316 349 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 ACKR3P25106 362 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 CD80P33681 288 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 DDOSTP39656 456 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 ZNF154Q13106 437 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 KLF17Q5JT82 389 aaPredicted RBP12.04□□□□□ -0.48
HMGN3-202ENST00000344726 C12orf73Q69YU5 71 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.04□□□□□ -0.48
HMGN3-202ENST00000344726 C11orf53Q8IXP5 236 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 OR8B12Q8NGG6 310 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 OR11L1Q8NGX0 322 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 DACT3Q96B18 629 aaPredicted RBP12.04□□□□□ -0.48
HMGN3-202ENST00000344726 NEIL1Q96FI4 390 aaPredicted RBP12.04□□□□□ -0.48
HMGN3-202ENST00000344726 SSBP3Q9BWW4 388 aaPredicted RBP12.04□□□□□ -0.48
HMGN3-202ENST00000344726 TEX12Q9BXU0 123 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 SEMA6AQ9H2E6 1030 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 SP140LQ9H930 580 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 FN3KRPQ9HA64 309 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 C1orf123Q9NWV4 160 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 RNF7Q9UBF6 113 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 LAMP5Q9UJQ1 280 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 RHBDD3Q9Y3P4 386 aa12.04□□□□□ -0.48
HMGN3-202ENST00000344726 ANKRD30BLA7E2S9 258 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 GRPP07492 148 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 POLR2IP36954 125 aaKnown RBP12.03□□□□□ -0.48
HMGN3-202ENST00000344726 PSMA6P60900 246 aaKnown RBP12.03□□□□□ -0.48
HMGN3-202ENST00000344726 OR8B8Q15620 311 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 AADACL4Q5VUY2 407 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 SFRP4Q6FHJ7 346 aaPredicted RBP12.03□□□□□ -0.48
HMGN3-202ENST00000344726 ZNF841Q6ZN19 808 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 DCDC5Q6ZRR9 648 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 ZDHHC13Q8IUH4 622 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 TCEANCQ8N8B7 351 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 BOLLQ8N9W6 283 aaKnown RBP12.03□□□□□ -0.48
HMGN3-202ENST00000344726 SPERTQ8NA61 448 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 PLPP7Q8NBV4 271 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 NANPQ8TBE9 248 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 CIB1Q99828 191 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 TTTY10Q9BZA0 68 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 YIPF3Q9GZM5 350 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 CTSZQ9UBR2 303 aa12.03□□□□□ -0.48
HMGN3-202ENST00000344726 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.02□□□□□ -0.49
HMGN3-202ENST00000344726 TNFRSF13BO14836 293 aaPredicted RBP12.02□□□□□ -0.49
HMGN3-202ENST00000344726 FCN3O75636 299 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 LHBP01229 141 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 FCGR1AP12314 374 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 EGR1P18146 543 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 PSMB10P40306 273 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 PITPNBP48739 271 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 GNB2P62879 340 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 CSNK2BP67870 215 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 PAX8Q06710 450 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 LCN1P1Q5VSP4 162 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 USP43Q70EL4 1123 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 MEPCEQ7L2J0 689 aaKnown RBP12.02□□□□□ -0.49
HMGN3-202ENST00000344726 KRT77Q7Z794 578 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 TEX29Q8N6K0 151 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 ZDHHC22Q8N966 263 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 OR8B3Q8NGG8 313 aa12.02□□□□□ -0.49
HMGN3-202ENST00000344726 TMEM163Q8TC26 289 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms