RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 SLC35A1P78382 337 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 MRPL14Q6P1L8 145 aaKnown RBP20.63■□□□□ 0.89
NDEL1-201ENST00000334527 EIF4E3Q8N5X7 224 aaKnown RBP20.63■□□□□ 0.89
NDEL1-201ENST00000334527 OR10K1Q8NGX5 313 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 FBXW5Q969U6 566 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 CLDN23Q96B33 292 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 ZNF75AQ96N20 296 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 EEF1E1-BLOC1S5C9J1V9 151 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 TP53I11O14683 189 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 TLX3O43711 291 aaPredicted RBP20.63■□□□□ 0.89
NDEL1-201ENST00000334527 CRTAPO75718 401 aaPredicted RBP20.63■□□□□ 0.89
NDEL1-201ENST00000334527 STARP49675 285 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 GRB2P62993 217 aaKnown RBP20.63■□□□□ 0.89
NDEL1-201ENST00000334527 BTN1A1Q13410 526 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 LYSMD4Q5XG99 296 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 NAA40Q86UY6 237 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 STPG2Q8N412 459 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 THAP6Q8TBB0 222 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 CYYR1Q96J86 154 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 ZNF416Q9BWM5 594 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 ZNF471Q9BX82 626 aaPredicted RBP20.63■□□□□ 0.89
NDEL1-201ENST00000334527 EML6Q6ZMW3 1958 aa20.62■□□□□ 0.89
NDEL1-201ENST00000334527 DMRTC1Q5HYR2 192 aa20.62■□□□□ 0.89
NDEL1-201ENST00000334527 SAP25Q8TEE9 199 aa20.62■□□□□ 0.89
NDEL1-201ENST00000334527 MS4A7Q9GZW8 240 aaPredicted RBP20.62■□□□□ 0.89
NDEL1-201ENST00000334527 LOC102725191A0A1B0GVB3 256 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 A0A1B0GW55 424 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 E9PLN8 166 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 GDF9O60383 454 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 CELA2AP08217 269 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 DUX4L2P0CJ85 424 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 DUX4L3P0CJ86 424 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 DUX4L4P0CJ87 422 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 DUX4L5P0CJ88 424 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 DUX4L6P0CJ89 424 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 DUX4L7P0CJ90 424 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 TMEM50BP56557 158 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 TMPPEQ6ZT21 453 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 TERB2Q8NHR7 220 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 DUX4Q9UBX2 424 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 ANAPC10Q9UM13 185 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 IGKV1-9A0A0C4DH69 117 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 C5orf63A6NC05 138 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 RAD51DO75771 328 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 FKBP2P26885 142 aaKnown RBP20.61■□□□□ 0.89
NDEL1-201ENST00000334527 TAS2R31P59538 309 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 PCOLCEQ15113 449 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 OR14K1Q8NGZ2 314 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 PGAM5Q96HS1 289 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 MBD2Q9UBB5 411 aa20.61■□□□□ 0.89
NDEL1-201ENST00000334527 C5orf51A6NDU8 294 aa20.6■□□□□ 0.89
NDEL1-201ENST00000334527 NAT1P18440 290 aa20.6■□□□□ 0.89
NDEL1-201ENST00000334527 OR56B1Q8NGI3 324 aa20.6■□□□□ 0.89
NDEL1-201ENST00000334527 ARHGAP5-AS1Q96IT6 56 aa20.6■□□□□ 0.89
NDEL1-201ENST00000334527 C13orf42A0A1B0GVH6 325 aa20.6■□□□□ 0.89
NDEL1-201ENST00000334527 TSPAN4O14817 238 aa20.6■□□□□ 0.89
NDEL1-201ENST00000334527 INO80EQ8NBZ0 244 aaPredicted RBP20.6■□□□□ 0.89
NDEL1-201ENST00000334527 ZBTB44Q8NCP5 570 aa20.6■□□□□ 0.89
NDEL1-201ENST00000334527 MRPS24Q96EL2 167 aaKnown RBP20.6■□□□□ 0.89
NDEL1-201ENST00000334527 DBX1A6NMT0 343 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 GUCA1AP43080 201 aaPredicted RBP20.59■□□□□ 0.89
NDEL1-201ENST00000334527 NPY4RP50391 375 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 VAX1Q5SQQ9 334 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 OR5D18Q8NGL1 313 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 SSC4DQ8WTU2 575 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 LIN37Q96GY3 246 aaPredicted RBP20.59■□□□□ 0.89
NDEL1-201ENST00000334527 URM1Q9BTM9 101 aaKnown RBP20.59■□□□□ 0.89
NDEL1-201ENST00000334527 PRKACBP22694 351 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 SERPINF1P36955 418 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 CSNK1A1P48729 337 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 PNLIPRP3Q17RR3 467 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 ACTBL2Q562R1 376 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 MOB3CQ70IA8 216 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 GTPBP8Q8N3Z3 284 aaPredicted RBP20.59■□□□□ 0.89
NDEL1-201ENST00000334527 NPRL2Q8WTW4 380 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 LYZL4Q96KX0 146 aa20.59■□□□□ 0.89
NDEL1-201ENST00000334527 MFNGO00587 321 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 MSR1P21757 451 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 LSM6P62312 80 aaKnown RBP20.58■□□□□ 0.89
NDEL1-201ENST00000334527 ARFRP1Q13795 201 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 PHYHD1Q5SRE7 291 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 ARMC10Q8N2F6 343 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 ARRDC1Q8N5I2 433 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 PHYHIPLQ96FC7 376 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 OR10A2Q9H208 303 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 GAREM1Q9H706 876 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 ZNF160Q9HCG1 818 aa20.58■□□□□ 0.89
NDEL1-201ENST00000334527 PI4KAP42356 2102 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 BET1O15155 118 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 KCNAB3O43448 404 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 WDPCPO95876 746 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 SLC6A9P48067 706 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 FAM189A2Q15884 450 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 TMEM128Q5BJH2 165 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 PNLDC1Q8NA58 520 aaKnown RBP20.58■□□□□ 0.88
NDEL1-201ENST00000334527 OCSTAMPQ9BR26 566 aa20.58■□□□□ 0.88
NDEL1-201ENST00000334527 BARX1Q9HBU1 254 aaPredicted RBP20.58■□□□□ 0.88
NDEL1-201ENST00000334527 CHMP1AQ9HD42 196 aaPredicted RBP20.58■□□□□ 0.88
NDEL1-201ENST00000334527 IGHV3-15A0A0B4J1V0 119 aa20.57■□□□□ 0.88
NDEL1-201ENST00000334527 F5H0A9 414 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms