RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 ACY3Q96HD9 319 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 GNRHR2Q96P88 292 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 IP6K3Q96PC2 410 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 NIPSNAP3BQ9BS92 247 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 RSRP1Q9BUV0 290 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 ANGPTL4Q9BY76 406 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 RAB33BQ9H082 229 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 PTGES2Q9H7Z7 377 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 TM7SF3Q9NS93 570 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 DECR2Q9NUI1 292 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 IGLV1-36A0A0B4J1U3 117 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 NPIPA5A0A0B4J1W7 369 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 TRAV1-1A0A0B4J248 108 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 ZNF726A6NNF4 738 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 C9J4A7 227 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 FTCDNL1E5RQL4 147 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 NPIPA7E9PJI5 369 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 CYR61O00622 381 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HSPA12AO43301 675 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 PITX3O75364 302 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 NPIPA8P0DM63 369 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 CEBPBP17676 345 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 AMY2BP19961 511 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 PTGER1P34995 402 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 MMP16P51512 607 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 LBX1P52954 281 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 TMEM33P57088 247 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 UBE2KP61086 200 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 SP3Q02447 781 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 EIF2B1Q14232 305 aaKnown RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 ANKRD55Q3KP44 614 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 KHDC3LQ587J8 217 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 RNF44Q7L0R7 432 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 TGIF2LYQ8IUE0 185 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 OR4S1Q8NGB4 309 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 OR10AD1Q8NGE0 317 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 OR52R1Q8NGF1 315 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 OR5D14Q8NGL3 314 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 GNPNAT1Q96EK6 184 aaPredicted RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 MARS2Q96GW9 593 aaKnown RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 PACRGQ96M98 296 aaPredicted RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 WDR92Q96MX6 357 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 SGIP1Q9BQI5 828 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 RTBDNQ9BSG5 229 aaPredicted RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 TXNIPQ9H3M7 391 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 CXXC1Q9P0U4 656 aaPredicted RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 LRP12Q9Y561 859 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 TRPM6Q9BX84 2022 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 RBFOX3A6NFN3 312 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 A8MWP6 167 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 LILRB3O75022 631 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 YIF1AO95070 293 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 TIMP1P01033 207 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 BGLAPP02818 100 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 RNF224P0DH78 156 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 ADH5P11766 374 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 RPS2P15880 293 aaKnown RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 TAGLN2P37802 199 aaKnown RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 ALDH3B1P43353 468 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 SUPT4H1P63272 117 aaKnown RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 PSG6Q00889 435 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 ZNF616Q08AN1 781 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 OR2A2Q6IF42 318 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 CA13Q8N1Q1 262 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 MFSD8Q8NHS3 518 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 MEGF10Q96KG7 1140 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 OR2A5Q96R48 311 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 LPAR4Q99677 370 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 G6PC2Q9NQR9 355 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 FBXO34Q9NWN3 711 aa4.79□□□□□ -1.64
USP8-201ENST00000307179 PTRH2Q9Y3E5 179 aaKnown RBP4.79□□□□□ -1.64
USP8-201ENST00000307179 MYOFQ9NZM1 2061 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 CLDN4O14493 209 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 FGF17O60258 216 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 CRTAPO75718 401 aaPredicted RBP4.78□□□□□ -1.64
USP8-201ENST00000307179 PCCBP05166 539 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 CSN2P05814 226 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 CEACAM1P13688 526 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 OR3A2P47893 321 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 RGS19P49795 217 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 ZNF133P52736 654 aaPredicted RBP4.78□□□□□ -1.64
USP8-201ENST00000307179 EMP2P54851 167 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 LSM6P62312 80 aaKnown RBP4.78□□□□□ -1.64
USP8-201ENST00000307179 AKIRIN2Q53H80 203 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 PRRT3Q5FWE3 981 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 C1orf140Q5VVS0 124 aa4.78□□□□□ -1.64
USP8-201ENST00000307179 CLEC9AQ6UXN8 241 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms