RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 C17orf47Q8NEP4 570 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 DEFB108BQ8NET1 73 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 OR13C8Q8NGS7 320 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 OIT3Q8WWZ8 545 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 CSAG2Q9Y5P2 127 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 SCN4AP35499 1836 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 HRKO00198 91 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 IGHV4-34P06331 123 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 DUSP1P28562 367 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 FCGR2CP31995 323 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 RAB11AP62491 216 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 ZNF718Q3SXZ3 478 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 ZNF468Q5VIY5 522 aaPredicted RBP12.54□□□□□ -0.4
CDH3-201ENST00000264012 APOBEC3DQ96AK3 386 aaPredicted RBP12.54□□□□□ -0.4
CDH3-201ENST00000264012 PUS1Q9Y606 427 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDH3-201ENST00000264012 PCM1Q15154 2024 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 SNRPGP15A8MWD9 76 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 CTLA4P16410 223 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 M6PRP20645 277 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 OR1S2Q8NGQ3 325 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 SLC23A1Q9UHI7 598 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 M0R1B8 84 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 PLPP3O14495 311 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 TPPPO94811 219 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 EPPINO95925 133 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 SSBP1Q04837 148 aaKnown RBP12.54□□□□□ -0.4
CDH3-201ENST00000264012 BAMBIQ13145 260 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 DEGS2Q6QHC5 323 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 ZAR1Q86SH2 424 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 OSR2Q8N2R0 312 aa12.54□□□□□ -0.4
CDH3-201ENST00000264012 APC2O95996 2303 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 A0A1B0GTQ1 180 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 IL3RAP26951 378 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 FUT6P51993 359 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 RAB1AP62820 205 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 SNRPNP63162 240 aaKnown RBP12.53□□□□□ -0.4
CDH3-201ENST00000264012 VASH2Q86V25 355 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 SFTPA2Q8IWL1 248 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 MFSD4AQ8N468 514 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 OR2AK2Q8NG84 335 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 OCIAD1Q9NX40 245 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 A0A1B0GTH9 108 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 SPRY1O43609 319 aaPredicted RBP12.53□□□□□ -0.4
CDH3-201ENST00000264012 DFFBO76075 338 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 NKX6-1P78426 367 aaPredicted RBP12.53□□□□□ -0.4
CDH3-201ENST00000264012 RAB35Q15286 201 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
CDH3-201ENST00000264012 WFDC8Q8IUA0 241 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 PCYT1BQ9Y5K3 369 aaPredicted RBP12.53□□□□□ -0.4
CDH3-201ENST00000264012 ATP23Q9Y6H3 246 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 ZNF638Q14966 1978 aaKnown RBP12.53□□□□□ -0.4
CDH3-201ENST00000264012 NTN1O95631 604 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 PSMB6P28072 239 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 UBE2KP61086 200 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 RAC1P63000 192 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 FUT7Q11130 342 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 ZNF766Q5HY98 468 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 H2BFWTQ7Z2G1 175 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 LHX9Q9NQ69 397 aa12.53□□□□□ -0.4
CDH3-201ENST00000264012 OR5H14A6NHG9 310 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 OR2F2O95006 317 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 GZMMP51124 257 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 HTD2P86397 168 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 OR2F1Q13607 317 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 LINC00303Q3SY05 128 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 SPATA46Q5T0L3 261 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 OR8G2PQ6IF36 304 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 DRAM2Q6UX65 266 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 DEFB124Q8NES8 71 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 OR2Y1Q8NGV0 311 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 ANGPTL6Q8NI99 470 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 MCHR2Q969V1 340 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 RP1P56715 2156 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.4
CDH3-201ENST00000264012 SPNP16150 400 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 SLC37A1P57057 533 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 SLC35G3Q8N808 338 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 OR5M9Q8NGP3 310 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 OR2AE1Q8NHA4 323 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 KISS1RQ969F8 398 aaPredicted RBP12.52□□□□□ -0.4
CDH3-201ENST00000264012 BORCS7Q96B45 105 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 WDFY2Q96P53 400 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 DHRS9Q9BPW9 319 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 UCK1Q9HA47 277 aa12.52□□□□□ -0.4
CDH3-201ENST00000264012 SERPINE3A8MV23 424 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 CCL4P13236 92 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 PRSS42Q7Z5A4 293 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 LSMEM1Q8N8F7 131 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 CMTM3Q96MX0 182 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 RASL10BQ96S79 203 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 TAF9BQ9HBM6 251 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 KLK10O43240 276 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 CDONQ4KMG0 1287 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 ATG4DQ86TL0 474 aaPredicted RBP12.52□□□□□ -0.41
CDH3-201ENST00000264012 ZNF808Q8N4W9 903 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms