RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RTN4IP1Q8WWV3 396 aaPredicted RBP12.06□□□□□ -0.48
NEK4-201ENST00000233027 NUDT9Q9BW91 350 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 VAMP5O95183 116 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 FGF7P21781 194 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 SHHQ15465 462 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ACOT6Q3I5F7 207 aaPredicted RBP12.06□□□□□ -0.48
NEK4-201ENST00000233027 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 LRRTM1Q86UE6 522 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 OSR2Q8N2R0 312 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 NOXO1Q8NFA2 376 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 CYSLTR2Q9NS75 346 aa12.06□□□□□ -0.48
NEK4-201ENST00000233027 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
NEK4-201ENST00000233027 FKBP2P26885 142 aaKnown RBP12.05□□□□□ -0.48
NEK4-201ENST00000233027 ARR3P36575 388 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 CMBLQ96DG6 245 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 FAM173AQ9BQD7 235 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 PLAC1Q9HBJ0 212 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 POMT2Q9UKY4 750 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 POLDIP2Q9Y2S7 368 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 HSPB2A8KAH6 182 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 G3V3Q6 166 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 LINC01565O15544 149 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 NQO2P16083 231 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 GPM6AP51674 278 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 HSPB2Q16082 182 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 SP6Q3SY56 376 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 CLEC9AQ6UXN8 241 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 ZNF793Q6ZN11 406 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 ZNF485Q8NCK3 441 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 ERGIC1Q969X5 290 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 DHRS9Q9BPW9 319 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 TMPRSS13Q9BYE2 586 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 CHEK1O14757 476 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 OR7C2O60412 319 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 HTRA4P83105 476 aaPredicted RBP12.05□□□□□ -0.48
NEK4-201ENST00000233027 TCTN1Q2MV58 587 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 ZNF573Q86YE8 665 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 ZADH2Q8N4Q0 377 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 IL21Q9HBE4 155 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 SUB1P53999 127 aaKnown RBP eCLIP12.05□□□□□ -0.48
NEK4-201ENST00000233027 ZNF425Q6IV72 752 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 ETFBKMTQ8IXQ9 262 aa12.05□□□□□ -0.48
NEK4-201ENST00000233027 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 YKT6O15498 198 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 SOX15O60248 233 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 ZP3P21754 424 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 FZD2Q14332 565 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 NCR3LG1Q68D85 454 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 CISD2Q8N5K1 135 aaKnown RBP12.04□□□□□ -0.48
NEK4-201ENST00000233027 SIGLECL1Q8N7X8 197 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.04□□□□□ -0.48
NEK4-201ENST00000233027 ESRP2Q9H6T0 727 aaKnown RBP12.04□□□□□ -0.48
NEK4-201ENST00000233027 TRAPPC4Q9Y296 219 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 A0A087WUJ7 227 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 A0A1B0GTH9 108 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 A0A1W2PPQ1 181 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 ARPC3O15145 178 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 GPR37O15354 613 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 CST7O76096 145 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 CSF2RBP32927 897 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 PNLIPRP2P54317 469 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 RAB1AP62820 205 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 RPL7L1Q6DKI1 246 aaKnown RBP12.04□□□□□ -0.48
NEK4-201ENST00000233027 GPR32P1Q8NGA4 272 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 OTOSQ8NHW6 89 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 MRGPRX4Q96LA9 322 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 CCDC74BQ96LY2 380 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 C12orf10Q9HB07 376 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 KCNE1BA0A087WTH5 132 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 SLC25A4P12235 298 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 TBPP20226 339 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 TMEM267Q0VDI3 215 aaPredicted RBP12.04□□□□□ -0.48
NEK4-201ENST00000233027 PRR27Q6MZM9 219 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 VASH2Q86V25 355 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 CLRN3Q8NCR9 226 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 MED19A0JLT2 244 aaPredicted RBP12.04□□□□□ -0.48
NEK4-201ENST00000233027 WDR38Q5JTN6 314 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 BOD1Q96IK1 185 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 PRDM7Q9NQW5 492 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 RNASEK-C17orf49H0YIS7 233 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 SLC17A2O00624 439 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 PCMT1P22061 227 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 DRAM2Q6UX65 266 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 NHLRC1Q6VVB1 395 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 C20orf196Q8IYI0 205 aa12.04□□□□□ -0.48
NEK4-201ENST00000233027 TNRC6CQ9HCJ0 1690 aaKnown RBP12.04□□□□□ -0.48
NEK4-201ENST00000233027 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 ZNF320A2RRD8 509 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 FMODQ06828 376 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 SLC38A6Q8IZM9 456 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 SIGLEC7Q9Y286 467 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 TMEM196Q5HYL7 178 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 ALKBH3Q96Q83 286 aaPredicted RBP12.03□□□□□ -0.48
NEK4-201ENST00000233027 ZNF251Q9BRH9 671 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 KIAA0040Q15053 153 aa12.03□□□□□ -0.48
NEK4-201ENST00000233027 ZNF561Q8N587 486 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms