RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PNLDC1Q8NA58 520 aaKnown RBP19.38■□□□□ 0.69
SMARCD2-201ENST00000225742 PAQR8Q8TEZ7 354 aa19.38■□□□□ 0.69
SMARCD2-201ENST00000225742 MR1Q95460 341 aa19.38■□□□□ 0.69
SMARCD2-201ENST00000225742 TMEM41AQ96HV5 264 aa19.38■□□□□ 0.69
SMARCD2-201ENST00000225742 OCSTAMPQ9BR26 566 aa19.38■□□□□ 0.69
SMARCD2-201ENST00000225742 SH2D2AQ9NP31 389 aa19.38■□□□□ 0.69
SMARCD2-201ENST00000225742 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMARCD2-201ENST00000225742 A0A0A6YYD4 124 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 CCDC85CA6NKD9 419 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 KRBOX1C9JBD0 128 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 D6RAR5 112 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 EFSO43281 561 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 DUS4LO95620 317 aaKnown RBP19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 SLC2A1P11166 492 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 OR3A4PP47883 348 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 SUCLG1P53597 346 aaKnown RBP19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 EIF4E3Q8N5X7 224 aaKnown RBP19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 C10orf35Q96D05 121 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 SCGB3A2Q96PL1 93 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 NICN1Q9BSH3 213 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 PTRH2Q9Y3E5 179 aaKnown RBP19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 KCNMB2Q9Y691 235 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 PI4KAP42356 2102 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 CEACAM18A8MTB9 384 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 NTN3O00634 580 aaPredicted RBP19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 MC2RQ01718 297 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 OVCH2Q7RTZ1 564 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 FAM89BQ8N5H3 189 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 FBXW5Q969U6 566 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 GPER1Q99527 375 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 ZNF160Q9HCG1 818 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 ZNF230Q9UIE0 474 aaPredicted RBP19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 V9GYS6 101 aa19.37■□□□□ 0.69
SMARCD2-201ENST00000225742 KANTRA0A1W2PQU2 76 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 OR2AT4A6NND4 320 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 NPIPA2E9PIF3 369 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 NPIPA3F8WFD2 350 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 DNPH1O43598 174 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 ARL6IP1Q15041 203 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 SLC22A6Q4U2R8 563 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 ACOT7LQ6ZUV0 252 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 TMEM104Q8NE00 496 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 TERB2Q8NHR7 220 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 PP6455Q8WZ26 134 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 ST8SIA2Q92186 375 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 CXorf58Q96LI9 332 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 SOX7Q9BT81 388 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 FSCN3Q9NQT6 498 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 DKKL1Q9UK85 242 aa19.36■□□□□ 0.69
SMARCD2-201ENST00000225742 GJE1A6NN92 205 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 A8MXK9 166 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 MFNGO00587 321 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 BCL2L11O43521 198 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 ZIC3O60481 467 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 PMP2P02689 132 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 KLK2P20151 261 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 HOXD11P31277 338 aaPredicted RBP19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 ENDOGQ14249 297 aaKnown RBP19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 PLAC9Q5JTB6 97 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 PEAR1Q5VY43 1037 aaPredicted RBP19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 TMEM123Q8N131 208 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 ARMC10Q8N2F6 343 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 OR9K2Q8NGE7 335 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 OR2Y1Q8NGV0 311 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 ST8SIA4Q92187 359 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 OR10A2Q9H208 303 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 A0A0B4J2A0 478 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 SOCS1O15524 211 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 DHHO43323 396 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 KLF7O75840 302 aaPredicted RBP19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 IGHEP01854 428 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 CELA2AP08217 269 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 CCL3P10147 92 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 ZFP36L1Q07352 338 aaKnown RBP19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 PHYHIPLQ96FC7 376 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 SPACA5Q96QH8 159 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 PROK2Q9HC23 129 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 SHPKQ9UHJ6 478 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 FLVCR1Q9Y5Y0 555 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 HS3ST3B1Q9Y662 390 aa19.35■□□□□ 0.69
SMARCD2-201ENST00000225742 IGKV1-9A0A0C4DH69 117 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 DBX1A6NMT0 343 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 CA11O75493 328 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 CRTAPO75718 401 aaPredicted RBP19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 DHRS3O75911 302 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 FGF2P09038 288 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 NAT2P11245 290 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 NUP62P37198 522 aaPredicted RBP19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 ZNF84P51523 738 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 MLF1P58340 268 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 RAC1P63000 192 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 MICBQ29980 383 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 RAET1LQ5VY80 246 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 RTL6Q6ICC9 239 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 JMJD6Q6NYC1 403 aaPredicted RBP19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 RNF144BQ7Z419 303 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 RPS19BP1Q86WX3 136 aaKnown RBP19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 TMEM185AQ8NFB2 350 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 THAP6Q8TBB0 222 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 NABP1Q96AH0 204 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms