RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MFNGO00587 321 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 SOCS1O15524 211 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 TRAF3IP2O43734 574 aaPredicted RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 CD79AP11912 226 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 OR3A4PP47883 348 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 FOXL2P58012 376 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 COL19A1Q14993 1142 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 SGCAQ16586 387 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 SLC25A47Q6Q0C1 308 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 DOK3Q7L591 496 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 PEG10Q86TG7 708 aaKnown RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 ARMC10Q8N2F6 343 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 OR6X1Q8NH79 312 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 POC1BQ8TC44 478 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 TMEM230Q96A57 120 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 SPACA5Q96QH8 159 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 URM1Q9BTM9 101 aaKnown RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 SLC7A5P2Q9GIP4 190 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 ATXN7L1Q9ULK2 861 aaPredicted RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 ADAMTS9Q9P2N4 1935 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 NDUFA2O43678 99 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 HCKP08631 526 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 SRFP11831 508 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 ZNF17P17021 662 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 NPY4RP50391 375 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 TMEM50BP56557 158 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 SIGLEC14Q08ET2 396 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 AIMP2Q13155 320 aaKnown RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 CLEC18BQ6UXF7 455 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 RNF144BQ7Z419 303 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 IQCF2Q8IXL9 164 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 SSC4DQ8WTU2 575 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 ARL11Q969Q4 196 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 PNRC2Q9NPJ4 139 aaKnown RBP11.76□□□□□ -0.53
SRP54-201ENST00000216774 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.76□□□□□ -0.53
SRP54-201ENST00000216774 CYTL1Q9NRR1 136 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 ASH2LQ9UBL3 628 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 WIF1Q9Y5W5 379 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 FLVCR1Q9Y5Y0 555 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 B3GALT1Q9Y5Z6 326 aa11.76□□□□□ -0.53
SRP54-201ENST00000216774 TOX3O15405 576 aaPredicted RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 SIGLEC6O43699 453 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 GRB2P62993 217 aaKnown RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 HIST3H3Q16695 136 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 PRSS54Q6PEW0 395 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 FAM89BQ8N5H3 189 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 ZSCAN4Q8NAM6 433 aaPredicted RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 RRNAD1Q96FB5 475 aaKnown RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 GHRLQ9UBU3 117 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 ADAMTS20P59510 1910 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 KCNAB3O43448 404 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 CRTAPO75718 401 aaPredicted RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 RAD51DO75771 328 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 H2AFB1P0C5Y9 115 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 CDAP32320 146 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 PTGDSP41222 190 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 TAS2R46P59540 309 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 MFAP5Q13361 173 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 SMAD4Q13485 552 aaKnown RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 STK11Q15831 433 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 ZNF239Q16600 458 aaKnown RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 NKAIN1Q4KMZ8 207 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 NKAPLQ5M9Q1 402 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 DRAM2Q6UX65 266 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 Q7L0L9 218 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 LHFPL1Q86WI0 220 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 OR10Z1Q8NGY1 313 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 ZC3H10Q96K80 434 aaKnown RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 FAM71F1Q96KD3 344 aaPredicted RBP11.75□□□□□ -0.53
SRP54-201ENST00000216774 OXGR1Q96P68 337 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 AQP10Q96PS8 301 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 MESP1Q9BRJ9 268 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 OR10A2Q9H208 303 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 BANF2Q9H503 90 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 ZNF319Q9P2F9 582 aa11.75□□□□□ -0.53
SRP54-201ENST00000216774 LOC102725191A0A1B0GVB3 256 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 H0YIZ8 118 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 RER1O15258 196 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 PET100P0DJ07 73 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 SLC2A1P11166 492 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 AMY2BP19961 511 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 SLC6A9P48067 706 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 ARHGDIBP52566 201 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 SUPT4H1P63272 117 aaKnown RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 SLC25A45Q8N413 288 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 PNLDC1Q8NA58 520 aaKnown RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 RHBDD1Q8TEB9 315 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 PAQR8Q8TEZ7 354 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 SLC25A43Q8WUT9 341 aaPredicted RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 ARHGAP5-AS1Q96IT6 56 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 GPER1Q99527 375 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 WDR77Q9BQA1 342 aaPredicted RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 RTBDNQ9BSG5 229 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms