RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Nde1Q9CZA6 344 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Timm50Q9D880 353 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 CalyQ9DCA7 226 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Ppp1r2Q9DCL8 206 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Icam4Q9ERM2 262 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Rcan2Q9JHG2 197 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Ak4Q9WUR9 223 aaKnown RBP5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Cfap46E9Q2C0 2641 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Hectd1Q69ZR2 2618 aaKnown RBP5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Shank1D3YZU1 2167 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Dock10Q8BZN6 2150 aa5.72□□□□□ -1.49
Ccdc54-201ENSMUST00000062439 Myo15aQ9QZZ4 3511 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Dmxl2Q8BPN8 3032 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Rpl7a-ps5A0A140T8L3 268 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm36864A0A1Y7VJE6 447 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Cytl1A1E5L0 139 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 A630010A05RikA9C473 232 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Tmed7D3YZZ5 224 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Vmn2r49D3Z6L3 852 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm3526E9PZM0 191 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm8444F6XS56 118 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Rnpepl1G5E872 720 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ms4a18J3QN01 344 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm7102J3QQ10 178 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Nipsnap2O55126 281 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Klrg1O88713 188 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Mtnd5P03921 607 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Htr3aP23979 487 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ido1P28776 407 aaKnown RBP5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ctps2P70303 586 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Tubg1P83887 451 aaKnown RBP5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Lemd1Q14C37 129 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Q3U4G0 281 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Prrc1Q3UPH1 443 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Scn2bQ56A07 215 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ms4a13Q5FWC3 203 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Slc34a1Q60825 637 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Il1rapQ61730 570 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Kiaa0754Q69ZZ9 979 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Katnb1Q8BG40 658 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Aqp11Q8BHH1 271 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gpr4Q8BUD0 365 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Acp7Q8BX37 438 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Q8C3W1 322 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Eri3Q8C460 337 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Samd4aQ8CBY1 711 aaKnown RBP5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 NraddQ8CJ26 228 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Slc16a14Q8K1C7 512 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Nectin4Q8R007 508 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Vmn1r33Q8R2E0 305 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ntmt1Q8R2U4 223 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Paip1Q8VE62 400 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 BsndQ8VIM4 307 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ptov1Q91VU8 416 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Mus81Q91ZJ0 551 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Acaa1aQ921H8 424 aaKnown RBP5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Mrpl1Q99N96 336 aaKnown RBP5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 MplkipQ9D011 178 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Chp2Q9D869 196 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Znf580Q9DB38 172 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 P2ry6Q9ERK9 328 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Znf319Q9ERR8 581 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 VapbQ9QY76 243 aaKnown RBP5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Keap1Q9Z2X8 624 aaKnown RBP5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Kcnj16Q9Z307 419 aa5.71□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Fbn2Q61555 2907 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm20820A0A087WPP3 222 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm28102A0A087WQL3 222 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm20911A0A087WSS0 222 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm28870A0A0A6YW38 222 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Slc43a3A2AVZ9 502 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ssxb6A2BI74 170 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ccdc62E9PVD1 701 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Vmn1r238E9Q373 306 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Olfr520E9Q518 316 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 2610001J05RikF2Z3Y9 59 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Mapk12O08911 367 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Rem1O35929 297 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Prl8a2O54832 240 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Icam1P13597 537 aaKnown RBP5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Mcpt4P21812 246 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Myl2P51667 166 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Sec61gP60060 68 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Naa20P61600 178 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Dppa5bP85965 119 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Rps5P97461 204 aaKnown RBP5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Stx2Q00262 289 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Gm10803Q3TZS6 135 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Mif4gdQ3UBZ5 222 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ankub1Q3UUE9 192 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Elmod1Q3V1U8 326 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Bcl2a1bQ497M6 172 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Olfr1505Q7TQQ2 316 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Olfr857Q7TRF7 309 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Mup21Q80YX8 181 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 1700001J03RikQ80ZR8 219 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Lrrtm2Q8BGA3 515 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Slc25a40Q8BGP6 337 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Pcdh20Q8BIZ0 952 aa5.7□□□□□ -1.5
Ccdc54-201ENSMUST00000062439 Ubqln3Q8C5U9 658 aa5.7□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms