RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 C3orf56Q8N813 242 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 OR10H4Q8NGA5 316 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 OR52I1Q8NGK6 324 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 OR1J2Q8NGS2 313 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 IPCEF1Q8WWN9 437 aaPredicted RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF799Q96GE5 643 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 C4orf45Q96LM5 186 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF184Q99676 751 aaPredicted RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 DOK1Q99704 481 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF442Q9H7R0 627 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 G6PC2Q9NQR9 355 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 MYEF2Q9P2K5 600 aaKnown RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 MRM2Q9UI43 246 aaKnown RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 LAMP5Q9UJQ1 280 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 EXOGQ9Y2C4 368 aaKnown RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 MYRFQ9Y2G1 1151 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 GRIP1Q9Y3R0 1128 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 LRP12Q9Y561 859 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PCDHGB1Q9Y5G3 927 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 HSPE1-MOB4S4R3N1 261 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF670-ZNF695F2Z2N8 137 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 WNT9BO14905 357 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SRSF10O75494 262 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 IGHA1P01876 353 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 LCKP06239 509 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 H2BFMP0C1H6 154 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 OR4A8P0C604 315 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 GLRXP35754 106 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SLC15A1P46059 708 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SLC6A9P48067 706 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 PPOXP50336 477 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 UCP2P55851 309 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF121P58317 390 aaPredicted RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 PSMA6P60900 246 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 GRB2P62993 217 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ACTC1P68032 377 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ACTA1P68133 377 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 MVKQ03426 396 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 RAB40BQ12829 278 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 DOC2BQ14184 412 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 HLXQ14774 488 aaPredicted RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 TAF13Q15543 124 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SNAI3Q3KNW1 292 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 THAP5Q7Z6K1 395 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 KRT77Q7Z794 578 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF786Q8N393 782 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 OR1J1Q8NGS3 322 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SLC25A40Q8TBP6 338 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ASB17Q8WXJ9 295 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SGCDQ92629 289 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 GTF3AQ92664 365 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SPTSSAQ969W0 71 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 MRPL24Q96A35 216 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 RNF166Q96A37 237 aaPredicted RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 MARS2Q96GW9 593 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 CNBD2Q96M20 576 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 C1orf147Q96MC9 270 aaPredicted RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 Q96MT0 163 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 OR8B4Q96RC9 309 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 DCLRE1CQ96SD1 692 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 MNTQ99583 582 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 KCNJ15Q99712 375 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 SYT3Q9BQG1 590 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF649Q9BS31 505 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 C1QTNF5Q9BXJ0 243 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 MRPL37Q9BZE1 423 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 OR2J1Q9GZK6 312 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 METTL17Q9H7H0 456 aaPredicted RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ACOXLQ9NUZ1 547 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 MRPS18AQ9NVS2 196 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 PAK1IP1Q9NWT1 392 aaPredicted RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 PTTG3PQ9NZH4 202 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF319Q9P2F9 582 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 METRNQ9UJH8 293 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 IKZF2Q9UKS7 526 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 STARD10Q9Y365 291 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 TMEM14AQ9Y6G1 99 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 DNAH7Q8WXX0 4024 aa6.28□□□□□ -1.4
PHGDH-225ENST00000641720 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
PHGDH-225ENST00000641720 NOTCH3Q9UM47 2321 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 SLC1A7O00341 560 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 FAM20BO75063 409 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 RGS9O75916 674 aaPredicted RBP6.27□□□□□ -1.41
PHGDH-225ENST00000641720 CLPTM1O96005 669 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 LCATP04180 440 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 ANXA2P07355 339 aaKnown RBP6.27□□□□□ -1.41
PHGDH-225ENST00000641720 OR2T7P0C7T2 308 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 HSD11B1P28845 292 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 ATP6V1E1P36543 226 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 SERPINF1P36955 418 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 ETV1P50549 477 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 CHN2P52757 468 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 TPTEP56180 551 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 LMO4P61968 165 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 RPS23P62266 143 aaKnown RBP6.27□□□□□ -1.41
PHGDH-225ENST00000641720 ACTG1P63261 375 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 ALKBH6Q3KRA9 238 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 TP53I3Q53FA7 332 aa6.27□□□□□ -1.41
PHGDH-225ENST00000641720 GLYATL3Q5SZD4 288 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms