RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 M0R129 80 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 PRR23D2P0DMB1 279 aaPredicted RBP14.82□□□□□ -0.04
PNKP-230ENST00000638016 ZNF12P17014 697 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 CD80P33681 288 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 HCCSP53701 268 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 ZNF121P58317 390 aaPredicted RBP14.82□□□□□ -0.04
PNKP-230ENST00000638016 ZNF154Q13106 437 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 ZNF181Q2M3W8 571 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 GFOD2Q3B7J2 385 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 ZNF404Q494X3 552 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 ESCO2Q56NI9 601 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 KLF17Q5JT82 389 aaPredicted RBP14.82□□□□□ -0.04
PNKP-230ENST00000638016 ZNF826PQ6ZT77 177 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 SLC16A9Q7RTY1 509 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 KLBQ86Z14 1044 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 RNF133Q8WVZ7 376 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 SGK3Q96BR1 496 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 INSIG2Q9Y5U4 225 aa14.82□□□□□ -0.04
PNKP-230ENST00000638016 PPIAL4EA0A075B759 164 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 IGHV3OR16-10A0A075B7F0 116 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 PPIAL4DF5H284 164 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 C3orf80F5H4A9 247 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 PPIAL4FP0DN26 164 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 GATA3P23771 443 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 HSD11B1P28845 292 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 OPRL1P41146 370 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 GRB2P62993 217 aaKnown RBP14.81□□□□□ -0.04
PNKP-230ENST00000638016 FAM3AP98173 230 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 SFRP4Q6FHJ7 346 aaPredicted RBP14.81□□□□□ -0.04
PNKP-230ENST00000638016 WDR86Q86TI4 376 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 MUC20Q8N307 709 aaPredicted RBP14.81□□□□□ -0.04
PNKP-230ENST00000638016 NANPQ8TBE9 248 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 Q8TCH9 128 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 SPSB4Q96A44 273 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 SSBP3Q9BWW4 388 aaPredicted RBP14.81□□□□□ -0.04
PNKP-230ENST00000638016 ZNF556Q9HAH1 456 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 ESM1Q9NQ30 184 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 POLR3KQ9Y2Y1 108 aaPredicted RBP14.81□□□□□ -0.04
PNKP-230ENST00000638016 PPIAL4AQ9Y536 164 aa14.81□□□□□ -0.04
PNKP-230ENST00000638016 SOX21Q9Y651 276 aaPredicted RBP14.81□□□□□ -0.04
PNKP-230ENST00000638016 PPIAL4CA0A0B4J2A2 164 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 hCG_38984A0A1B0GV85 526 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 LRRC30A6NM36 301 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 IFNL4K9M1U5 179 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 XRCC2O43543 280 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 MITFO75030 526 aaPredicted RBP14.8□□□□□ -0.04
PNKP-230ENST00000638016 GRPP07492 148 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 PAICSP22234 425 aaKnown RBP14.8□□□□□ -0.04
PNKP-230ENST00000638016 SLC2A5P22732 501 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 DAPP51397 102 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 BLVRAP53004 296 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 PAX2Q02962 417 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 BCDIN3DQ7Z5W3 292 aaKnown RBP14.8□□□□□ -0.04
PNKP-230ENST00000638016 BCL6BQ8N143 479 aaPredicted RBP14.8□□□□□ -0.04
PNKP-230ENST00000638016 CELF2-AS1Q8N7Q2 184 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 OTOSQ8NHW6 89 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 UTP4Q969X6 686 aaKnown RBP14.8□□□□□ -0.04
PNKP-230ENST00000638016 REEP6Q96HR9 211 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 TTTY10Q9BZA0 68 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 SLC25A19Q9HC21 320 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 TVP23BQ9NYZ1 205 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 MRPL15Q9P015 296 aaKnown RBP14.8□□□□□ -0.04
PNKP-230ENST00000638016 CTSZQ9UBR2 303 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 OR5V1Q9UGF6 321 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 AUP1Q9Y679 476 aa14.8□□□□□ -0.04
PNKP-230ENST00000638016 CCDC182A6NF36 153 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 PRR32B1ATL7 298 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 PSMD9O00233 223 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 MRPL3P09001 348 aaKnown RBP14.79□□□□□ -0.04
PNKP-230ENST00000638016 H2BFMP0C1H6 154 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 ANXA8P13928 327 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 IRF2P14316 349 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 EGR1P18146 543 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 SLC15A1P46059 708 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 HILS1P60008 231 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 RPS7P62081 194 aaKnown RBP14.79□□□□□ -0.04
PNKP-230ENST00000638016 GNB2P62879 340 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 ELF3P78545 371 aaPredicted RBP14.79□□□□□ -0.04
PNKP-230ENST00000638016 POU4F2Q12837 409 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 APOFQ13790 326 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 TIGD6Q17RP2 521 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 FAHD1Q6P587 224 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 LRRN1Q6UXK5 716 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 C1orf87Q8N0U7 546 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 OR11L1Q8NGX0 322 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 ZNF418Q8TF45 676 aaPredicted RBP14.79□□□□□ -0.04
PNKP-230ENST00000638016 THEM6Q8WUY1 208 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 DACT3Q96B18 629 aaPredicted RBP14.79□□□□□ -0.04
PNKP-230ENST00000638016 NEIL1Q96FI4 390 aaPredicted RBP14.79□□□□□ -0.04
PNKP-230ENST00000638016 YY1AP1Q9H869 796 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 C1orf123Q9NWV4 160 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 KIF17Q9P2E2 1029 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 ZNF69Q9UC07 566 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 LRCH1Q9Y2L9 728 aa14.79□□□□□ -0.04
PNKP-230ENST00000638016 A6NLC8 198 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 GMDSO60547 372 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 PTBP3O95758 552 aaKnown RBP14.78□□□□□ -0.04
PNKP-230ENST00000638016 HMGN1P05114 100 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 LYNP07948 512 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 EPHA2P29317 976 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms