RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ALOX5APP20292 161 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SERPINA2P20848 420 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 CRABP1P29762 137 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 RFC3P40938 356 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 NPY4RP50391 375 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF84P51523 738 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 PNLIPRP2P54317 469 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 PMPCAQ10713 525 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OR2F1Q13607 317 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 CD226Q15762 336 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 FAM122BQ7Z309 247 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 TRAPPC6BQ86SZ2 158 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 UEVLDQ8IX04 471 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 GPX8Q8TED1 209 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 PFDN5Q99471 154 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SLC19A3Q9BZV2 496 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF160Q9HCG1 818 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 UBQLN4Q9NRR5 601 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 KLK13Q9UKR3 277 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 A6NLC8 198 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 TMEM212A6NML5 194 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SULT2B1O00204 365 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 TP53I11O14683 189 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 YKT6O15498 198 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 TPT1P13693 172 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OMGP23515 440 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SDHAP31040 664 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 CD96P40200 585 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 KIR2DL1P43626 348 aaPredicted RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 CYCSP99999 105 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SRYQ05066 204 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 MFGE8Q08431 387 aaPredicted RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 CCINQ13939 588 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 EBPQ15125 230 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 MESTQ5EB52 335 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 NAA40Q86UY6 237 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 BAP18Q8IXM2 172 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 C19orf47Q8N9M1 422 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OR4A4PQ8NGN8 299 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 RRNAD1Q96FB5 475 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 TCTN2Q96GX1 697 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 DCBLD2Q96PD2 775 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 PRRT1Q99946 306 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 UTP23Q9BRU9 249 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 HINT2Q9BX68 163 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OR51B6Q9H340 312 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ZFP57Q9NU63 452 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 UQCC1Q9NVA1 299 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SLC17A4Q9Y2C5 497 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 FRYLO94915 3013 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 TTLL8A6PVC2 850 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 CYR61O00622 381 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SLC17A2O00624 439 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SNAPC5O75971 98 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SNAPINO95295 136 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 WISP1O95388 367 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 DIRAS3O95661 229 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 IFNA2P01563 188 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 CD1CP29017 333 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MGAT2Q10469 447 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 GGTLC2Q14390 218 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 C14orf28Q4W4Y0 310 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ADAM5Q6NVV9 412 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 FJX1Q86VR8 437 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SGPP2Q8IWX5 399 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SEMA6DQ8NFY4 1073 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 C16orf52Q8NHV5 167 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 FNDC9Q8TBE3 224 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 AKR1E2Q96JD6 320 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 C4orf45Q96LM5 186 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 STACQ99469 402 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MAP3K3Q99759 626 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SLC25A21Q9BQT8 299 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF426Q9BUY5 554 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 EHFQ9NZC4 300 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 PILRAQ9UKJ1 303 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 FRYQ5TBA9 3013 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 OBSL1O75147 1896 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SPTY2D1-AS1A0A0U1RR47 76 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 C9orf170A2RU37 121 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SMCO3A2RU48 225 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SERINC4A6NH21 518 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ARPC3O15145 178 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF264O43296 627 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 IFNA5P01569 189 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 DBHP09172 617 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 CPT2P23786 658 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 PSMB6P28072 239 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 EIF2S3P41091 472 aaKnown RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 TSFMP43897 325 aaKnown RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 POLR2GP62487 172 aaKnown RBP eCLIP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 PLP2Q04941 152 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MPPED2Q15777 294 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF684Q5T5D7 378 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 TMEM244Q5VVB8 128 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 WBP2NLQ6ICG8 309 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 NPSR1Q6W5P4 371 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF709Q8N972 641 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 OR5D14Q8NGL3 314 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 OR2I1PQ8NGU4 316 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms