RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 THEGLP0DJG4 465 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 ZNF93P35789 620 aaPredicted RBP17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 HLA-DQA1Q5Y7H0 255 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 FAM219AQ8IW50 185 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 ZNF101Q8IZC7 436 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 ARRDC1Q8N5I2 433 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 TMEM104Q8NE00 496 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 OR5D14Q8NGL3 314 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 SLAMF6Q96DU3 332 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 SPACA5Q96QH8 159 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 WWTR1Q9GZV5 400 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 NPIPA1Q9UND3 350 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 IGHV5-51A0A0C4DH38 117 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 TCRBV21S2A2A0A5A6 115 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 COLCA2A8K830 154 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 SOCS1O15524 211 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 CSTBP04080 98 aaKnown RBP17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 CHRM2P08172 466 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 GSTP1P09211 210 aaKnown RBP17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 GABRG2P18507 467 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 PI3P19957 117 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 LPAR6P43657 344 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 GFERP55789 205 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 FOXK1P85037 733 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 ELAVL1Q15717 326 aaKnown RBP17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 OR10S1Q8NGN2 331 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 NUBPLQ8TB37 319 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 C1orf147Q96MC9 270 aaPredicted RBP17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 RTBDNQ9BSG5 229 aaPredicted RBP17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 RNASEK-C17orf49H0YIS7 233 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 RAD51DO75771 328 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 SFTA3P0C7M3 94 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 ZP4Q12836 540 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 RAB32Q13637 225 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 ACTBL2Q562R1 376 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 SLC29A4Q7RTT9 530 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 PEG10Q86TG7 708 aaKnown RBP17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 NAA40Q86UY6 237 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 POC1AQ8NBT0 407 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 LRRC61Q9BV99 259 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 SLC26A1Q9H2B4 701 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 RNF122Q9H9V4 155 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 MED29Q9NX70 200 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 WIF1Q9Y5W5 379 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 ADAM10O14672 748 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 LRP3O75074 770 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 EIF3GO75821 320 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 HIST1H1DP16402 221 aaKnown RBP17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 BCKDHBP21953 392 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 FPR2P25090 351 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 DAP3P51398 398 aaKnown RBP17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 PEA15Q15121 130 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 KLHL24Q6TFL4 600 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 GLIPR1L1Q6UWM5 242 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 C11orf40Q8WZ69 217 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 RAB3CQ96E17 227 aa17.36■□□□□ 0.37
PDLIM3-212ENST00000620787 MPIG6BO95866 241 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 TMEM50BP56557 158 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 IL15RAQ13261 267 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 HABP2Q14520 560 aaPredicted RBP17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 C5orf46Q6UWT4 87 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 TTLL10Q6ZVT0 673 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 ARL5BQ96KC2 179 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 C2orf50Q96LR7 162 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 SEC61A2Q9H9S3 476 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 GPR27Q9NS67 375 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 DNAJB11Q9UBS4 358 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 SRPK3Q9UPE1 567 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 MRPS28Q9Y2Q9 187 aaKnown RBP17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 PCDHGA1Q9Y5H4 931 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 CD5P06127 495 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 FOLR2P14207 255 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 GPR85P60893 370 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 C9orf50Q5SZB4 431 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 RPL7L1Q6DKI1 246 aaKnown RBP17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 OR5AS1Q8N127 324 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 TMEM41AQ96HV5 264 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 TGM7Q96PF1 710 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 CUTCQ9NTM9 273 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 SLCO1B1Q9Y6L6 691 aa17.35■□□□□ 0.37
PDLIM3-212ENST00000620787 SEC16AO15027 2179 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 CDC14BO60729 498 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 ZNF354AO60765 605 aaPredicted RBP17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 MED6O75586 246 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 ACAA1P09110 424 aaPredicted RBP17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 RCC1P18754 421 aaPredicted RBP17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 PTGFRP43088 359 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 POU3F1Q03052 451 aaPredicted RBP17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 LHFPL1Q86WI0 220 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 MISPQ8IVT2 679 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 OR13G1Q8NGZ3 307 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 OR51E1Q8TCB6 317 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 BANF2Q9H503 90 aa17.34■□□□□ 0.37
PDLIM3-212ENST00000620787 C9JQL5 133 aa17.33■□□□□ 0.37
PDLIM3-212ENST00000620787 FCGR3AP08637 254 aa17.33■□□□□ 0.37
PDLIM3-212ENST00000620787 OR3A4PP47883 348 aa17.33■□□□□ 0.37
PDLIM3-212ENST00000620787 BTNL8Q6UX41 500 aa17.33■□□□□ 0.37
PDLIM3-212ENST00000620787 OCSTAMPQ9BR26 566 aa17.33■□□□□ 0.37
PDLIM3-212ENST00000620787 CRB3Q9BUF7 120 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms