RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PDCD1Q15116 288 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 OR8B8Q15620 311 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 METTL11BQ5VVY1 283 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 DCXRQ7Z4W1 244 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 OR2T33Q8NG76 320 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 OR4F5Q8NH21 305 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 GATAD2BQ8WXI9 593 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 DUX5Q96PT3 197 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 DDOQ99489 341 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 FN3KQ9H479 309 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 MAGIXQ9H6Y5 334 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 UFSP2Q9NUQ7 469 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 TBC1D23Q9NUY8 699 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 ARL2BPQ9Y2Y0 163 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 POMT1Q9Y6A1 747 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 COMMD3-BMI1R4GMX3 469 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 IGHV3-64DA0A0J9YX35 117 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 A6NLC8 198 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 RIIAD1A6NNX1 92 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 GPR37O15354 613 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 ADAM20O43506 726 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 TOX4O94842 621 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF3P17036 446 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 HOXB6P17509 224 aaKnown RBP9.91□□□□□ -0.82
UPF3B-204ENST00000619445 PYCR1P32322 319 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 MAGEA2P43356 314 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 HNRNPA0Q13151 305 aaKnown RBP9.91□□□□□ -0.82
UPF3B-204ENST00000619445 MPPED2Q15777 294 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 FAM201AQ5SY85 155 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 PRAMEF6Q5VXH4 476 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 SPATC1Q76KD6 591 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 NAA40Q86UY6 237 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 DEFB107AQ8IZN7 70 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 CYB561A3Q8NBI2 242 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 OR52H1Q8NGJ2 320 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 OR8S1Q8NH09 359 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 TBC1D15Q8TC07 691 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 SSMEM1Q8WWF3 244 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 SPSB4Q96A44 273 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 TMIGD2Q96BF3 282 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 SLAMF6Q96DU3 332 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 RGCCQ9H4X1 137 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 EGLN3Q9H6Z9 239 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 RNPEPL1Q9HAU8 725 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 BEX1Q9HBH7 125 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 ABCB9Q9NP78 766 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 KAAG1Q9UBP8 84 aa9.91□□□□□ -0.82
UPF3B-204ENST00000619445 hCG_1807616A0A1W2PRN6 198 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF593O00488 134 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-204ENST00000619445 TNFRSF13BO14836 293 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-204ENST00000619445 SPARCP09486 303 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 MUC1P15941 1255 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-204ENST00000619445 HSD11B1P28845 292 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 CFHR2P36980 270 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 NAA10P41227 235 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-204ENST00000619445 OCLNQ16625 522 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 MICBQ29980 383 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 SNAI3Q3KNW1 292 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 GLYATL3Q5SZD4 288 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 LYPD2Q6UXB3 125 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 Q6YL49 198 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 SHFQ7M4L6 423 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 SLC37A3Q8NCC5 494 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 CSNK2A3Q8NEV1 391 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 OR56B2PQ8NGI1 322 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 ITFG2Q969R8 447 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 BTBD10Q9BSF8 475 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 PCGF1Q9BSM1 259 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 TSSK6Q9BXA6 273 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 DGCR6LQ9BY27 220 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 REEP1Q9H902 201 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 CENPMQ9NSP4 180 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 C1orf123Q9NWV4 160 aa9.9□□□□□ -0.82
UPF3B-204ENST00000619445 CAB39Q9Y376 341 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-204ENST00000619445 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 TVP23AA6NH52 213 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 C22orf46C9J442 243 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 C3orf80F5H4A9 247 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 HOXA3O43365 443 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-204ENST00000619445 NDUFA7O95182 113 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 KNG1P01042 644 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 SPI1P17947 270 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 PAICSP22234 425 aaKnown RBP9.89□□□□□ -0.83
UPF3B-204ENST00000619445 MSX2P35548 267 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-204ENST00000619445 GNALP38405 381 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 PRKXP51817 358 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 CRMP1Q14194 572 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 TIGD6Q17RP2 521 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 MICAQ29983 383 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 DEFB112Q30KQ8 113 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 FAM98BQ52LJ0 330 aaKnown RBP9.89□□□□□ -0.83
UPF3B-204ENST00000619445 TEX36Q5VZQ5 186 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 OR2T5Q6IEZ7 315 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 ZNF770Q6IQ21 691 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-204ENST00000619445 TREML4Q6UXN2 200 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 CD300LDQ6UXZ3 194 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 C17orf107Q6ZR85 190 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 SLC36A1Q7Z2H8 476 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 AQP11Q8NBQ7 271 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms