RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ZNF814B7Z6K7 855 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 EFNA2O43921 213 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 SERPINA5P05154 406 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 SERPINA2P20848 420 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 PSMB6P28072 239 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 SCAND1P57086 179 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-207ENST00000612273 MYBPHQ13203 477 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 PLAC9Q5JTB6 97 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 DNM1P34Q6PK57 102 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 TMEM234Q8WY98 164 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 AQP3Q92482 292 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 METTL7AQ9H8H3 244 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 OR5AC2Q9NZP5 309 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 A0A1B0GTI1 187 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 FTCDNL1E5RQL4 147 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 RAD51DO75771 328 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 OR2F2O95006 317 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 GUSBP08236 651 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 IFI6P09912 130 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 CCR5P51681 352 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 CLDN6P56747 220 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 OR2F1Q13607 317 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 MEF2DQ14814 521 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 AKIRIN1Q9H9L7 192 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-207ENST00000612273 RHBDD3Q9Y3P4 386 aa12.47□□□□□ -0.41
COL6A1-207ENST00000612273 A0A0A6YYD4 124 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 H0YIZ8 118 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 ZNHIT1O43257 154 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 TIAF1O95411 115 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 AMY2BP19961 511 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 CALCRP30988 508 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 BRICD5Q6PL45 260 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 C1QL2Q7Z5L3 287 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 OR10G3Q8NGC4 313 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 OR5AP2Q8NGF4 316 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 MITD1Q8WV92 249 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 THRSPQ92748 146 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 JSRP1Q96MG2 331 aaPredicted RBP12.46□□□□□ -0.41
COL6A1-207ENST00000612273 SLC17A5Q9NRA2 495 aa12.46□□□□□ -0.41
COL6A1-207ENST00000612273 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 IGHV1OR21-1A0A087WYE8 117 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 MASP2O00187 686 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 SULT1C2O00338 296 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 LDLRAD4O15165 306 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 ATG12O94817 140 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 NME2P22392 152 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 NFYBP25208 207 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 TDGQ13569 410 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.42
COL6A1-207ENST00000612273 MOB3CQ70IA8 216 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.42
COL6A1-207ENST00000612273 KCNK17Q96T54 332 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 TLNRD1Q9H1K6 362 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 C8orf33Q9H7E9 229 aaPredicted RBP12.46□□□□□ -0.42
COL6A1-207ENST00000612273 CHST11Q9NPF2 352 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 FAM206AQ9NX38 181 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 PPP4R1LQ9P1A2 415 aa12.46□□□□□ -0.42
COL6A1-207ENST00000612273 A0A1B0GTQ1 180 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 BLACEA4D250 179 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 ZNF878C9JN71 531 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 CD74P04233 296 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 HEXBP07686 556 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 DAP3P51398 398 aaKnown RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 RBM39Q14498 530 aaKnown RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 H3F3CQ6NXT2 135 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 CLRN3Q8NCR9 226 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 RNF133Q8WVZ7 376 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 PIGTQ969N2 578 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM59Q9BXS4 323 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 BARX1Q9HBU1 254 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM200CA6NKL6 621 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 BET1O15155 118 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 SRSF10O75494 262 aaKnown RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 CD8AP01732 235 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 CRHP06850 196 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 CSNK2A1P68400 391 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 CSNK2A3Q8NEV1 391 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 OR51T1Q8NGJ9 327 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 ZNF285Q96NJ3 590 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 SLCO5A1Q9H2Y9 848 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 FSCN3Q9NQT6 498 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 A0A1B0GX78 115 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 E9PLN8 166 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 H7C2Y5 167 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 OR2J2O76002 312 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 IL32P24001 234 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 GABRR1P24046 479 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 ZNF41P51814 821 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 DCAF7P61962 342 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 HNRNPKP61978 463 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 C1orf100Q5SVJ3 147 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 IQCF2Q8IXL9 164 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 OR8B12Q8NGG6 310 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 NUBPLQ8TB37 319 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 HDHD3Q9BSH5 251 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-207ENST00000612273 LPAR5Q9H1C0 372 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms