RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 OR8J1Q8NGP2 316 aa13.27□□□□□ -0.29
RPS28-203ENST00000600659 ZNF420Q8TAQ5 688 aaPredicted RBP13.27□□□□□ -0.29
RPS28-203ENST00000600659 DVL3Q92997 716 aaPredicted RBP13.27□□□□□ -0.29
RPS28-203ENST00000600659 REEP6Q96HR9 211 aa13.27□□□□□ -0.29
RPS28-203ENST00000600659 OR8B4Q96RC9 309 aa13.27□□□□□ -0.29
RPS28-203ENST00000600659 OPA3Q9H6K4 179 aa13.27□□□□□ -0.29
RPS28-203ENST00000600659 TMEM100Q9NV29 134 aa13.27□□□□□ -0.29
RPS28-203ENST00000600659 FAM206AQ9NX38 181 aa13.27□□□□□ -0.29
RPS28-203ENST00000600659 N6AMT1Q9Y5N5 214 aa13.27□□□□□ -0.29
RPS28-203ENST00000600659 DOCK11Q5JSL3 2073 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 IGHV3-64DA0A0J9YX35 117 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 LOC100289279A0A1B0GTE1 492 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 MAGEB4O15481 346 aaPredicted RBP13.26□□□□□ -0.29
RPS28-203ENST00000600659 TBX1O43435 398 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 LMX1BO60663 402 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 IGLV3-1P01715 115 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 IGHV2-5P01817 119 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 GABRB1P18505 474 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 CA6P23280 308 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 ACKR3P25106 362 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 HTR1FP30939 366 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 OR8B8Q15620 311 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 FAM166AQ6J272 317 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 DEGS2Q6QHC5 323 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 SLC35F2Q8IXU6 374 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 C10orf67Q8IYJ2 551 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 LINC01356Q8N9X3 169 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 OR52H1Q8NGJ2 320 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 FAM81AQ8TBF8 368 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 C9orf16Q9BUW7 83 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 PPP1R3EQ9H7J1 279 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 NIPAL2Q9H841 368 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 BRD7Q9NPI1 651 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 MRPL15Q9P015 296 aaKnown RBP13.26□□□□□ -0.29
RPS28-203ENST00000600659 PPP1R3CQ9UQK1 317 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 NPTNQ9Y639 398 aa13.26□□□□□ -0.29
RPS28-203ENST00000600659 GGT3PA6NGU5 568 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 TMEM178BH3BS89 294 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 APOL3O95236 402 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 PNPP00491 289 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 TGFAP01135 160 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 APOC1P02654 83 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 DCTDP32321 178 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 CDC42P60953 191 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 CXCR4P61073 352 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 HOXA4Q00056 320 aaPredicted RBP13.25□□□□□ -0.29
RPS28-203ENST00000600659 MPPED2Q15777 294 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 TIGD6Q17RP2 521 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 ZNF181Q2M3W8 571 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 KRTAP21-3Q3LHN1 58 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 ZNF684Q5T5D7 378 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 KRT77Q7Z794 578 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 ZNF679Q8IYX0 411 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 CELF2-AS1Q8N7Q2 184 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 OR51G2Q8NGK0 314 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 Q8TCH9 128 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 SPRYD4Q8WW59 207 aaPredicted RBP13.25□□□□□ -0.29
RPS28-203ENST00000600659 PGAM5Q96HS1 289 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 ADAT1Q9BUB4 502 aaKnown RBP13.25□□□□□ -0.29
RPS28-203ENST00000600659 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 CLN6Q9NWW5 311 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 AASSQ9UDR5 926 aa13.25□□□□□ -0.29
RPS28-203ENST00000600659 WARS2Q9UGM6 360 aaKnown RBP13.25□□□□□ -0.29
RPS28-203ENST00000600659 CYB5R3P00387 301 aaPredicted RBP13.24□□□□□ -0.29
RPS28-203ENST00000600659 SRP9P49458 86 aaKnown RBP13.24□□□□□ -0.29
RPS28-203ENST00000600659 GSK3AP49840 483 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 SLC3A1Q07837 685 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 MFGE8Q08431 387 aaPredicted RBP13.24□□□□□ -0.29
RPS28-203ENST00000600659 ZMYND11Q15326 602 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 SLC25A30Q5SVS4 291 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 KCTD18Q6PI47 426 aaPredicted RBP13.24□□□□□ -0.29
RPS28-203ENST00000600659 ZNF322Q6U7Q0 402 aaPredicted RBP13.24□□□□□ -0.29
RPS28-203ENST00000600659 WDR86Q86TI4 376 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 MOGAT3Q86VF5 341 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
RPS28-203ENST00000600659 ASB17Q8WXJ9 295 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 RAB1CQ92928 201 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 MNTQ99583 582 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 OR10A2Q9H208 303 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 MRM2Q9UI43 246 aaKnown RBP13.24□□□□□ -0.29
RPS28-203ENST00000600659 TMEM14AQ9Y6G1 99 aa13.24□□□□□ -0.29
RPS28-203ENST00000600659 B4DSR2 109 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 J3QRE1 110 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 GMDSO60547 372 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 ENTPD6O75354 484 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 DDOSTP39656 456 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 DVL1P1P54792 670 aaPredicted RBP13.23□□□□□ -0.29
RPS28-203ENST00000600659 SNRPGP62308 76 aaKnown RBP13.23□□□□□ -0.29
RPS28-203ENST00000600659 BTG1P62324 171 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 OR8G1Q15617 311 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 ZSCAN26Q16670 478 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 GFOD2Q3B7J2 385 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 FAM201AQ5SY85 155 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 PLEKHG7Q6ZR37 379 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 ZBTB49Q6ZSB9 765 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 LRRC28Q86X40 367 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms