RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KCNS2Q9ULS6 477 aa14.12□□□□□ -0.15
SSBP4-204ENST00000597724 FAM157AC9JC47 383 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 E9PQ18 207 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 IFNL4K9M1U5 179 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 GMDSO60547 372 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 DDOSTP39656 456 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 FAM3AP98173 230 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 ROM1Q03395 351 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 MAB21L1Q13394 359 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 TIGD6Q17RP2 521 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 ZIK1Q3SY52 487 aaPredicted RBP14.11□□□□□ -0.15
SSBP4-204ENST00000597724 CELF2-AS1Q8N7Q2 184 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 OR56B2PQ8NGI1 322 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 TRUB1Q8WWH5 349 aaKnown RBP14.11□□□□□ -0.15
SSBP4-204ENST00000597724 ASB17Q8WXJ9 295 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 REEP6Q96HR9 211 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 PGAM5Q96HS1 289 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 SIGLEC11Q96RL6 698 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 MNTQ99583 582 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 SLC29A1Q99808 456 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 OR10A2Q9H208 303 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF665Q9H7R5 613 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 ADGRL4Q9HBW9 690 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 MRPL15Q9P015 296 aaKnown RBP14.11□□□□□ -0.15
SSBP4-204ENST00000597724 WARS2Q9UGM6 360 aaKnown RBP14.11□□□□□ -0.15
SSBP4-204ENST00000597724 COPS3Q9UNS2 423 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 NOP16Q9Y3C1 178 aaKnown RBP14.11□□□□□ -0.15
SSBP4-204ENST00000597724 NPTNQ9Y639 398 aa14.11□□□□□ -0.15
SSBP4-204ENST00000597724 IGHV3-64DA0A0J9YX35 117 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 PRR32B1ATL7 298 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 B4DSR2 109 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 PSMD9O00233 223 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF254O75437 659 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 IGHV2-70P01814 119 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 SBK2P0C263 348 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 CFL1P23528 166 aaKnown RBP14.1□□□□□ -0.15
SSBP4-204ENST00000597724 HTR1FP30939 366 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 DCTDP32321 178 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 CD200P41217 278 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 GATA4P43694 442 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 MMP16P51512 607 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 PSMA6P60900 246 aaKnown RBP14.1□□□□□ -0.15
SSBP4-204ENST00000597724 OR8G1Q15617 311 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 ZBTB49Q6ZSB9 765 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 SLC35F2Q8IXU6 374 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF679Q8IYX0 411 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 FAM81AQ8TBF8 368 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 UBE2FQ969M7 185 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 OR8B4Q96RC9 309 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 MROQ9BYG7 248 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 RGCCQ9H4X1 137 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 CLN6Q9NWW5 311 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 CDC42EP3Q9UKI2 254 aa14.1□□□□□ -0.15
SSBP4-204ENST00000597724 hCG_38984A0A1B0GV85 526 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 ACOD1A6NK06 481 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 TMEM178BH3BS89 294 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 IGHV2-5P01817 119 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 GSK3AP49840 483 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 CXCR4P61073 352 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 POU4F2Q12837 409 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 TMED1Q13445 227 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF181Q2M3W8 571 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 GFOD2Q3B7J2 385 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 KRTAP21-3Q3LHN1 58 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF322Q6U7Q0 402 aaPredicted RBP14.09□□□□□ -0.15
SSBP4-204ENST00000597724 MOGAT3Q86VF5 341 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 KLBQ86Z14 1044 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 RFLNBQ8N5W9 214 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 OR51G2Q8NGK0 314 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 ZNF420Q8TAQ5 688 aaPredicted RBP14.09□□□□□ -0.15
SSBP4-204ENST00000597724 STMN2Q93045 179 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 EME1Q96AY2 570 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 RAB39BQ96DA2 213 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 MBOAT4Q96T53 435 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 GAL3ST1Q99999 423 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 ADAT1Q9BUB4 502 aaKnown RBP14.09□□□□□ -0.15
SSBP4-204ENST00000597724 IMPAD1Q9NX62 359 aa14.09□□□□□ -0.15
SSBP4-204ENST00000597724 ISPDA4D126 451 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 PHYHO14832 338 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 PTBP3O95758 552 aaKnown RBP14.08□□□□□ -0.16
SSBP4-204ENST00000597724 BAG2O95816 211 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 PMELP40967 661 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 DVL1P1P54792 670 aaPredicted RBP14.08□□□□□ -0.16
SSBP4-204ENST00000597724 SNRPGP62308 76 aaKnown RBP14.08□□□□□ -0.16
SSBP4-204ENST00000597724 BTG1P62324 171 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 ZMYND11Q15326 602 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 CHRFAM7AQ494W8 412 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 SLC25A30Q5SVS4 291 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 LRRC28Q86X40 367 aaPredicted RBP14.08□□□□□ -0.16
SSBP4-204ENST00000597724 SPERTQ8NA61 448 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 OR8B12Q8NGG6 310 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 RFKQ969G6 155 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 ERGIC1Q969X5 290 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 APOL4Q9BPW4 351 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 TTTY10Q9BZA0 68 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 FAM206AQ9NX38 181 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 ZNF391Q9UJN7 358 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 IKZF2Q9UKS7 526 aa14.08□□□□□ -0.16
SSBP4-204ENST00000597724 TMEM269A0A1B0GVZ9 245 aa14.07□□□□□ -0.16
SSBP4-204ENST00000597724 ANKRD30BLA7E2S9 258 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms