RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 FSTL3O95633 263 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 PLATP00750 562 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 RNASE1P07998 156 aaKnown RBP14.17□□□□□ -0.14
CCDC9-202ENST00000595659 OTX1P32242 354 aaPredicted RBP14.17□□□□□ -0.14
CCDC9-202ENST00000595659 MAGEA2P43356 314 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 MTNR1AP48039 350 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 MS4A2Q01362 244 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 DEFB112Q30KQ8 113 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 SPATS1Q496A3 300 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 DHFR2Q86XF0 187 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 LINC00471Q8N535 108 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 SLC25A28Q96A46 364 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 OTULINQ96BN8 352 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 KCNJ15Q99712 375 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 PCGF1Q9BSM1 259 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 ZNF747Q9BV97 191 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 SLC22A4Q9H015 551 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 C1orf123Q9NWV4 160 aa14.17□□□□□ -0.14
CCDC9-202ENST00000595659 IGHV3OR15-7A0A075B7D8 119 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 LGALS8O00214 317 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 PHYHO14832 338 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 ADAM20O43506 726 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 GMDSO60547 372 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 GYPAP02724 150 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 SFTPBP07988 381 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 PPIAL4GP0DN37 164 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 OMGP23515 440 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 PSMB10P40306 273 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 SLC25A1P53007 311 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 MICAQ29983 383 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 RUSC1-AS1Q66K80 236 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 OR2T5Q6IEZ7 315 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 IQCF1Q8N6M8 205 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 OR2T33Q8NG76 320 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 OR2T29Q8NH02 315 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 NSL1Q96IY1 281 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 NMNAT2Q9BZQ4 307 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 REEP1Q9H902 201 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 UNKLQ9H9P5 680 aaKnown RBP14.16□□□□□ -0.14
CCDC9-202ENST00000595659 MRPL15Q9P015 296 aaKnown RBP14.16□□□□□ -0.14
CCDC9-202ENST00000595659 ERVK-18Q9QC07 812 aa14.16□□□□□ -0.14
CCDC9-202ENST00000595659 NOP16Q9Y3C1 178 aaKnown RBP14.16□□□□□ -0.14
CCDC9-202ENST00000595659 hCG_1807616A0A1W2PRN6 198 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 DHRS12A0PJE2 317 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 FAM183AA6NL82 134 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 TMPRSS2O15393 492 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 HOXA3O43365 443 aaPredicted RBP14.15□□□□□ -0.14
CCDC9-202ENST00000595659 IFNGP01579 166 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 ANXA2P07355 339 aaKnown RBP14.15□□□□□ -0.14
CCDC9-202ENST00000595659 CX3CR1P49238 355 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 MNAT1P51948 309 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 EIF2B1Q14232 305 aaKnown RBP14.15□□□□□ -0.14
CCDC9-202ENST00000595659 PCK2Q16822 640 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 C9orf139Q6ZV77 190 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 ZDHHC16Q969W1 377 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 NIPSNAP1Q9BPW8 284 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 PPP1R3EQ9H7J1 279 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 ZMAT3Q9HA38 289 aaKnown RBP14.15□□□□□ -0.14
CCDC9-202ENST00000595659 SMURF1Q9HCE7 757 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 BRD7Q9NPI1 651 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 DNAJC27Q9NZQ0 273 aa14.15□□□□□ -0.14
CCDC9-202ENST00000595659 OOEPA6NGQ2 149 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 RIIAD1A6NNX1 92 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 ZNF878C9JN71 531 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 ENSAO43768 121 aaKnown RBP14.14□□□□□ -0.15
CCDC9-202ENST00000595659 PTBP3O95758 552 aaKnown RBP14.14□□□□□ -0.15
CCDC9-202ENST00000595659 ELF3P78545 371 aaPredicted RBP14.14□□□□□ -0.15
CCDC9-202ENST00000595659 TRIM25Q14258 630 aaKnown RBP14.14□□□□□ -0.15
CCDC9-202ENST00000595659 KCNJ8Q15842 424 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 TEX30Q5JUR7 227 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 LINC01590Q5TEZ4 76 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 LCN8Q6JVE9 175 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 SHISA2Q6UWI4 295 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 DPY19L4Q7Z388 723 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 ERI1Q8IV48 349 aaKnown RBP14.14□□□□□ -0.15
CCDC9-202ENST00000595659 OR10G2Q8NGC3 310 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 OR6N2Q8NGY6 317 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 SGK3Q96BR1 496 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 CLPTM1LQ96KA5 538 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 AMELYQ99218 206 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 DGCR6LQ9BY27 220 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 MAGIXQ9H6Y5 334 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 BAIAP2Q9UQB8 552 aa14.14□□□□□ -0.15
CCDC9-202ENST00000595659 TRAV38-1A0A0B4J264 116 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.13□□□□□ -0.15
CCDC9-202ENST00000595659 ANKRD30BLA7E2S9 258 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 CLDN34H7C241 214 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 TNFRSF13BO14836 293 aaPredicted RBP14.13□□□□□ -0.15
CCDC9-202ENST00000595659 FCN3O75636 299 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 ZNF3P17036 446 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 MDKP21741 143 aaPredicted RBP14.13□□□□□ -0.15
CCDC9-202ENST00000595659 HSD11B1P28845 292 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 CFHR2P36980 270 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 FAM3AP98173 230 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 TIGD6Q17RP2 521 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 GFOD2Q3B7J2 385 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 FAM98BQ52LJ0 330 aaKnown RBP14.13□□□□□ -0.15
CCDC9-202ENST00000595659 GPR157Q5UAW9 335 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 FAM57BQ71RH2 274 aa14.13□□□□□ -0.15
CCDC9-202ENST00000595659 SLC16A9Q7RTY1 509 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms