RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 FAM120AOSQ5T036 256 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 LCN1P1Q5VSP4 162 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF771Q7L3S4 317 aaPredicted RBP9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 SPRYD4Q8WW59 207 aaPredicted RBP9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 RAB1CQ92928 201 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 TIMD4Q96H15 378 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 CNN2Q99439 309 aaKnown RBP9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 TTTY10Q9BZA0 68 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 PRRG3Q9BZD7 231 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 LPAR2Q9HBW0 351 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 ADGRL4Q9HBW9 690 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 S100A14Q9HCY8 104 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 BRD7Q9NPI1 651 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 USE1Q9NZ43 259 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 ENOPH1Q9UHY7 261 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 LAMP5Q9UJQ1 280 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 CDC42EP3Q9UKI2 254 aa9.25□□□□□ -0.93
SHKBP1-206ENST00000595523 GGT3PA6NGU5 568 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 PSMD9O00233 223 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 PTBP3O95758 552 aaKnown RBP9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 APOC1P02654 83 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 MSMBP08118 114 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 CD200P41217 278 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 SRP9P49458 86 aaKnown RBP9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 DVL1P1P54792 670 aaPredicted RBP9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 HOXA4Q00056 320 aaPredicted RBP9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 ROM1Q03395 351 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 MPPED2Q15777 294 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 TIGD6Q17RP2 521 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 CR1LQ2VPA4 569 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 CHRFAM7AQ494W8 412 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 PRAMEF6Q5VXH4 476 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 MOGAT3Q86VF5 341 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 CBR4Q8N4T8 237 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 OR8B12Q8NGG6 310 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 OR52H1Q8NGJ2 320 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 UBE2FQ969M7 185 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 REEP6Q96HR9 211 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 LYZL4Q96KX0 146 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 RAB3IPQ96QF0 476 aaPredicted RBP9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 MBOAT4Q96T53 435 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 ADAT1Q9BUB4 502 aaKnown RBP9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 OPA3Q9H6K4 179 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 PPP1R3EQ9H7J1 279 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM206AQ9NX38 181 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 HAO2Q9NYQ3 351 aa9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 MRPL15Q9P015 296 aaKnown RBP9.24□□□□□ -0.93
SHKBP1-206ENST00000595523 ISPDA4D126 451 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 SLC22A31A6NKX4 558 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 MAGEB4O15481 346 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 PLPP2O43688 288 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 SRSF10O75494 262 aaKnown RBP9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF205O95201 554 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 CYB5R3P00387 301 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM157CP0CG43 387 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 ACKR3P25106 362 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 GSK3AP49840 483 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 ALDH3A2P51648 485 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 BTG1P62324 171 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 OR8G1Q15617 311 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 OR8B8Q15620 311 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF181Q2M3W8 571 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 GFOD2Q3B7J2 385 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 ZIK1Q3SY52 487 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM201AQ5SY85 155 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 DEGS2Q6QHC5 323 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 SSX6Q7RTT6 188 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 KRT77Q7Z794 578 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 WDR86Q86TI4 376 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 LRRC28Q86X40 367 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 GID4Q8IVV7 300 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 SLC35F2Q8IXU6 374 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 PQLC1Q8N2U9 271 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 CELF2-AS1Q8N7Q2 184 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 OR8J1Q8NGP2 316 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 Q8TCH9 128 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM186Q96B77 213 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 PGAM5Q96HS1 289 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 HRASLS5Q96KN8 279 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 OR8B4Q96RC9 309 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 SLC29A1Q99808 456 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 GAL3ST1Q99999 423 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 SHARPINQ9H0F6 387 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 OR10A2Q9H208 303 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 G6PC2Q9NQR9 355 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 UBAP1Q9NZ09 502 aa9.23□□□□□ -0.93
SHKBP1-206ENST00000595523 F5H0A9 414 aaPredicted RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 IFNL4K9M1U5 179 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 GMDSO60547 372 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM20BO75063 409 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 APOL3O95236 402 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 PNPP00491 289 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 SBK2P0C263 348 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 ZFP36P26651 326 aaKnown RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 HTR1FP30939 366 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 CXCR4P61073 352 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 SEC61A1P61619 476 aaKnown RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 MFGE8Q08431 387 aaPredicted RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM155Q4W5P6 130 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms