RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 KLHDC2Q9Y2U9 406 aa16.9■□□□□ 0.3
CIRBP-239ENST00000592467 PRODHO43272 600 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 GMDSO60547 372 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 ADRA2CP18825 462 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 PAICSP22234 425 aaKnown RBP16.89■□□□□ 0.29
CIRBP-239ENST00000592467 FAM3AP98173 230 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 TAF13Q15543 124 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 ZNF404Q494X3 552 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 SHFQ7M4L6 423 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 MUC20Q8N307 709 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-239ENST00000592467 PARP8Q8N3A8 854 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 OR56B2PQ8NGI1 322 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 DVL3Q92997 716 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-239ENST00000592467 ERGIC1Q969X5 290 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 DACT3Q96B18 629 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-239ENST00000592467 DUS3LQ96G46 650 aaKnown RBP16.89■□□□□ 0.29
CIRBP-239ENST00000592467 TMEM246Q9BRR3 403 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 SLC22A4Q9H015 551 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 PCDHB10Q9UN67 800 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 DOCK11Q5JSL3 2073 aa16.89■□□□□ 0.29
CIRBP-239ENST00000592467 GGT3PA6NGU5 568 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 XRCC2O43543 280 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 FAM20BO75063 409 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 VENTXO95231 258 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 ZNF12P17014 697 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 SLC15A1P46059 708 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 CRISP1P54107 249 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 ZNF121P58317 390 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-239ENST00000592467 OR8G1Q15617 311 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 ATP6AP1Q15904 470 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 TUSC1Q2TAM9 212 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 SLC35D3Q5M8T2 416 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 SLC16A9Q7RTY1 509 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 OR5K1Q8NHB7 308 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 DNAJC9Q8WXX5 260 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 ADAT1Q9BUB4 502 aaKnown RBP16.88■□□□□ 0.29
CIRBP-239ENST00000592467 OPA3Q9H6K4 179 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 C7orf69Q9H7B7 122 aa16.88■□□□□ 0.29
CIRBP-239ENST00000592467 PAPOLBQ9NRJ5 636 aaKnown RBP16.88■□□□□ 0.29
CIRBP-239ENST00000592467 hCG_38984A0A1B0GV85 526 aa16.87■□□□□ 0.29
CIRBP-239ENST00000592467 CCDC182A6NF36 153 aa16.87■□□□□ 0.29
CIRBP-239ENST00000592467 EFNB1P98172 346 aa16.87■□□□□ 0.29
CIRBP-239ENST00000592467 KLBQ86Z14 1044 aa16.87■□□□□ 0.29
CIRBP-239ENST00000592467 LRCH1Q9Y2L9 728 aa16.87■□□□□ 0.29
CIRBP-239ENST00000592467 N6AMT1Q9Y5N5 214 aa16.87■□□□□ 0.29
CIRBP-239ENST00000592467 INSIG2Q9Y5U4 225 aa16.87■□□□□ 0.29
CIRBP-239ENST00000592467 A0A0A6YYJ9 748 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 MITFO75030 526 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-239ENST00000592467 ATP5HO75947 161 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 LYNP07948 512 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 ALOX5APP20292 161 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 EPHA1P21709 976 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 CPT2P23786 658 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 HSD11B1P28845 292 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 EPHA2P29317 976 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 ZNF154Q13106 437 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 PTGES3Q15185 160 aaKnown RBP16.86■□□□□ 0.29
CIRBP-239ENST00000592467 LIPNQ5VXI9 398 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 LYPD2Q6UXB3 125 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 FAM57BQ71RH2 274 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 WDR86Q86TI4 376 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 ZNF454Q8N9F8 522 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 PLPP7Q8NBV4 271 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 C19orf18Q8NEA5 215 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 MMADHCQ9H3L0 296 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-239ENST00000592467 PPP1R3EQ9H7J1 279 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 UFSP2Q9NUQ7 469 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 TVP23BQ9NYZ1 205 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 DNAJC27Q9NZQ0 273 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 PPIAL4AQ9Y536 164 aa16.86■□□□□ 0.29
CIRBP-239ENST00000592467 LRRC30A6NM36 301 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 TNFRSF13BO14836 293 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-239ENST00000592467 TBX1O43435 398 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 ANXA2P07355 339 aaKnown RBP16.85■□□□□ 0.29
CIRBP-239ENST00000592467 DDOSTP39656 456 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 NAA10P41227 235 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-239ENST00000592467 RASSF2P50749 326 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 HCCSP53701 268 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 KLF17Q5JT82 389 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-239ENST00000592467 ZNF841Q6ZN19 808 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 C1orf87Q8N0U7 546 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 TEX29Q8N6K0 151 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 REEP6Q96HR9 211 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 TEAD3Q99594 435 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 GABARAPL1Q9H0R8 117 aa16.85■□□□□ 0.29
CIRBP-239ENST00000592467 NOP16Q9Y3C1 178 aaKnown RBP16.85■□□□□ 0.29
CIRBP-239ENST00000592467 PRR32B1ATL7 298 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 PRKYO43930 277 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 APOC1P02654 83 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 H2BFMP0C1H6 154 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 RPS2P15880 293 aaKnown RBP16.84■□□□□ 0.29
CIRBP-239ENST00000592467 PSMB10P40306 273 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 ESRRGP62508 458 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 PAX8Q06710 450 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 APOFQ13790 326 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 SNAPC1Q16533 368 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 ESCO2Q56NI9 601 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 KDM4DQ6B0I6 523 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 ASRGL1Q7L266 308 aa16.84■□□□□ 0.29
CIRBP-239ENST00000592467 C11orf53Q8IXP5 236 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms