RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 DLX1P56177 255 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 FXYD6P3P58550 94 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 ELF3P78545 371 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZNF92Q03936 586 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 PRB3Q04118 309 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 DBPQ10586 325 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 TRAP1Q12931 704 aaKnown RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 CRIP3Q6Q6R5 217 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 MRPL21Q7Z2W9 205 aaKnown RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 VTCN1Q7Z7D3 282 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 C11orf53Q8IXP5 236 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 CMTM4Q8IZR5 234 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 OR6V1Q8N148 313 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 C11orf44Q8N8P7 122 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 BEND2Q8NDZ0 799 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 CCL13Q99616 98 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 PITX2Q99697 317 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 ATF6BQ99941 703 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 MRPL15Q9P015 296 aaKnown RBP8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 CYB5R1Q9UHQ9 305 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 AURKCQ9UQB9 309 aa8.15□□□□□ -1.1
CALCOCO2-227ENST00000575560 A0A1W2PRD5 423 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 A0A1W2PRF3 423 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 A0A1W2PRM7 423 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 MEIOCA2RUB1 952 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 PAHP00439 452 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 AMY2BP19961 511 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 ANOS1P23352 680 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 GGT2P36268 569 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 TGM4P49221 684 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 CENPAP49450 140 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 UBE2E1P51965 193 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 TPTEP56180 551 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 EMX1Q04741 257 aaPredicted RBP8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 ACSM1Q08AH1 577 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 MICBQ29980 383 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 SNAI3Q3KNW1 292 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 METTL21CQ5VZV1 264 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 DPY19L2P2Q6ZN68 376 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 ZBTB46Q86UZ6 589 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 LINC00346Q8IVM7 164 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 PNKDQ8N490 385 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 KLHDC1Q8N7A1 406 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 C8orf46Q8TAG6 207 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 SLC7A13Q8TCU3 470 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 LZICQ8WZA0 190 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 SGCDQ92629 289 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 AJUBAQ96IF1 538 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 FAM46AQ96IP4 442 aaKnown RBP8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 DCTN5Q9BTE1 182 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 NDEL1Q9GZM8 345 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 TOR3AQ9H497 397 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 ANKRD19PQ9H560 264 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 RNPEPL1Q9HAU8 725 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 SRA1Q9HD15 236 aaKnown RBP8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 PRPF19Q9UMS4 504 aaKnown RBP8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 TMEM5Q9Y2B1 443 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 MAB21L2Q9Y586 359 aa8.14□□□□□ -1.11
CALCOCO2-227ENST00000575560 GGT3PA6NGU5 568 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 A6NLC8 198 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 FAM220BPB1ANY3 271 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 H3BUX3 64 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 M0R135 149 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 BHLHE40O14503 412 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OTX1P32242 354 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OMPP47874 163 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 RPS6KA3P51812 740 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 KLRD1Q13241 179 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 PCK2Q16822 640 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 RFX4Q33E94 735 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 COQ5Q5HYK3 327 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 WDR38Q5JTN6 314 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 ATPAF1Q5TC12 328 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 DNM1P34Q6PK57 102 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 RRM2BQ7LG56 351 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 SLC36A1Q7Z2H8 476 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 WDR86Q86TI4 376 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR2T12Q8NG77 320 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR4S1Q8NGB4 309 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR4C13Q8NGP0 309 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR2AJ1Q8NGZ0 328 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR2AE1Q8NHA4 323 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 OR2T6Q8NHC8 308 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 PHF21AQ96BD5 680 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 ZNF799Q96GE5 643 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 MAP6Q96JE9 813 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 SSX3Q99909 188 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 MEGF9Q9H1U4 602 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 RANBP3Q9H6Z4 567 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 C14orf119Q9NWQ9 140 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 ADA2Q9NZK5 511 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 DNAJB11Q9UBS4 358 aa8.13□□□□□ -1.11
CALCOCO2-227ENST00000575560 hCG_1807616A0A1W2PRN6 198 aa8.12□□□□□ -1.11
CALCOCO2-227ENST00000575560 A0A1W2PRQ8 180 aa8.12□□□□□ -1.11
CALCOCO2-227ENST00000575560 ADARB2-AS1A8MUL3 147 aa8.12□□□□□ -1.11
CALCOCO2-227ENST00000575560 ACOT8O14734 319 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms