RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ZNF773Q6PK81 442 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 AKR7LQ8NHP1 331 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 SPATA3Q8NHX4 192 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 SYNPRQ8TBG9 265 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 SNX33Q8WV41 574 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 RDH5Q92781 318 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 SLAMF6Q96DU3 332 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 MRPL48Q96GC5 212 aaKnown RBP12.88□□□□□ -0.35
RAB40B-203ENST00000570676 MYCBPQ99417 103 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-203ENST00000570676 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 WNT5BQ9H1J7 359 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 CENPMQ9NSP4 180 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 PLEK2Q9NYT0 353 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 TAAR3PQ9P1P4 343 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 CLEC2DQ9UHP7 191 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 IKZF2Q9UKS7 526 aa12.88□□□□□ -0.35
RAB40B-203ENST00000570676 A0A087WXM4 84 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 C17orf100A8MU93 164 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 PRR32B1ATL7 298 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 PSMD9O00233 223 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 SGCEO43556 437 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 ICMTO60725 284 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 STOMP27105 288 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 RAD52P43351 418 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 MAP2K4P45985 399 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 MRPS11P82912 194 aaKnown RBP12.87□□□□□ -0.35
RAB40B-203ENST00000570676 IRF3Q14653 427 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 CCDC92Q53HC0 331 aaPredicted RBP12.87□□□□□ -0.35
RAB40B-203ENST00000570676 RNLSQ5VYX0 342 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 ZNF774Q6NX45 483 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 RFPL4BQ6ZWI9 263 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 KRT77Q7Z794 578 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 PHC2Q8IXK0 858 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 SPARTQ8N0X7 666 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 SVOPQ8N4V2 548 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 OR10S1Q8NGN2 331 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 OR1J1Q8NGS3 322 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 GTF3AQ92664 365 aaKnown RBP12.87□□□□□ -0.35
RAB40B-203ENST00000570676 OR8B4Q96RC9 309 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 ZNF649Q9BS31 505 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
RAB40B-203ENST00000570676 SLCO1C1Q9NYB5 712 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 ERGIC3Q9Y282 383 aa12.87□□□□□ -0.35
RAB40B-203ENST00000570676 FBN1P35555 2871 aaKnown RBP12.87□□□□□ -0.35
RAB40B-203ENST00000570676 ZNF878C9JN71 531 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 MYL12BO14950 172 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 MAGEB4O15481 346 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-203ENST00000570676 PHF1O43189 567 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-203ENST00000570676 DOK2O60496 412 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 IGHV3-13P01766 116 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 KRT8P05787 483 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 H2BFMP0C1H6 154 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 SRD5A1P18405 259 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 GPR6P46095 362 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-203ENST00000570676 ACTA2P62736 377 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 ACTG2P63267 376 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 ROM1Q03395 351 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 EGR3Q06889 387 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 TAF13Q15543 124 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 CR1LQ2VPA4 569 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 CDONQ4KMG0 1287 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 TP53I3Q53FA7 332 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 LRRN1Q6UXK5 716 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 TMPRSS11AQ6ZMR5 421 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 PLEKHG7Q6ZR37 379 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 VASH1Q7L8A9 365 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-203ENST00000570676 ALDH16A1Q8IZ83 802 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 KLHL36Q8N4N3 616 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 NANOGP1Q8N7R0 232 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 LINC01356Q8N9X3 169 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 CLDND2Q8NHS1 167 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 MND1Q9BWT6 205 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 HDHD2Q9H0R4 259 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 PNRC2Q9NPJ4 139 aaKnown RBP12.86□□□□□ -0.35
RAB40B-203ENST00000570676 GNG8Q9UK08 70 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 CAB39Q9Y376 341 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-203ENST00000570676 COL6A5A8TX70 2615 aa12.86□□□□□ -0.35
RAB40B-203ENST00000570676 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 C5orf49A4QMS7 147 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 RNF212BA8MTL3 300 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 J3QLW9 94 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 WNT9BO14905 357 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 ZNF254O75437 659 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 SMIM18P0DKX4 95 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 ATP6V1B1P15313 513 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 ZNF19P17023 458 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 CCNOP22674 350 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 MPV17P39210 176 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 OPRL1P41146 370 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 HTR5AP47898 357 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 GDI2P50395 445 aaKnown RBP12.85□□□□□ -0.35
RAB40B-203ENST00000570676 OR12D2P58182 307 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 SPATA46Q5T0L3 261 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 OR2G6Q5TZ20 316 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 RHOUQ7L0Q8 258 aa12.85□□□□□ -0.35
RAB40B-203ENST00000570676 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms