RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 ZFYVE26Q68DK2 2539 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 IGLV1-44P01699 117 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 CECR9P0C854 216 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 ZNF20P17024 532 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 ASPHD2Q6ICH7 369 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 ALKBH2Q6NS38 261 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 NR2C2APQ86WQ0 139 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 ZNF101Q8IZC7 436 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 FAM169BQ8N8A8 192 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 AKAP1Q92667 903 aaKnown RBP eCLIP26.45■■□□□ 1.82
CTCF-203ENST00000566078 ADAT3Q96EY9 351 aaPredicted RBP26.45■■□□□ 1.82
CTCF-203ENST00000566078 OR51B6Q9H340 312 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 CKLFQ9UBR5 152 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 V9GYS6 101 aa26.45■■□□□ 1.82
CTCF-203ENST00000566078 A6NIN4 97 aa26.44■■□□□ 1.82
CTCF-203ENST00000566078 NGFP01138 241 aa26.44■■□□□ 1.82
CTCF-203ENST00000566078 FSTP19883 344 aa26.44■■□□□ 1.82
CTCF-203ENST00000566078 OR10A3P58181 314 aa26.44■■□□□ 1.82
CTCF-203ENST00000566078 ZNF92Q03936 586 aa26.44■■□□□ 1.82
CTCF-203ENST00000566078 TSC22D3Q99576 134 aa26.44■■□□□ 1.82
CTCF-203ENST00000566078 AK6Q9Y3D8 172 aaKnown RBP26.44■■□□□ 1.82
CTCF-203ENST00000566078 IGHV1-18A0A0C4DH31 117 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 MTRF1O75570 445 aaKnown RBP26.43■■□□□ 1.82
CTCF-203ENST00000566078 PRB1P04280 392 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 GNALP38405 381 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 ZNF83P51522 516 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 RFPL4BQ6ZWI9 263 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 PARP16Q8N5Y8 322 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 CCDC54Q8NEL0 328 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 MCFD2Q8NI22 146 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 USB1Q9BQ65 265 aaKnown RBP26.43■■□□□ 1.82
CTCF-203ENST00000566078 ERRFI1Q9UJM3 462 aaPredicted RBP26.43■■□□□ 1.82
CTCF-203ENST00000566078 PDCD5O14737 125 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 CLPXO76031 633 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 MAS1P04201 325 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 MALLQ13021 153 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 ZNF404Q494X3 552 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 CEP78Q5JTW2 689 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 C1QTNF12Q5T7M4 302 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 Q6ZSR3 168 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 LRRTM1Q86UE6 522 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 SPSB4Q96A44 273 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 DACH2Q96NX9 599 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 TBCCD1Q9NVR7 557 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 PTTG3PQ9NZH4 202 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 EIF3KQ9UBQ5 218 aaKnown RBP26.43■■□□□ 1.82
CTCF-203ENST00000566078 FOXJ3Q9UPW0 622 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 STARD10Q9Y365 291 aa26.43■■□□□ 1.82
CTCF-203ENST00000566078 LOC390937A0A1W2PQ73 354 aa26.42■■□□□ 1.82
CTCF-203ENST00000566078 IGFBP3P17936 291 aaPredicted RBP26.42■■□□□ 1.82
CTCF-203ENST00000566078 PAX7P23759 505 aa26.42■■□□□ 1.82
CTCF-203ENST00000566078 PRSS12P56730 875 aa26.42■■□□□ 1.82
CTCF-203ENST00000566078 SERPINA12Q8IW75 414 aa26.42■■□□□ 1.82
CTCF-203ENST00000566078 OR10A4Q9H209 315 aa26.42■■□□□ 1.82
CTCF-203ENST00000566078 POFUT1Q9H488 388 aa26.42■■□□□ 1.82
CTCF-203ENST00000566078 NPAP1Q9NZP6 1156 aa26.42■■□□□ 1.82
CTCF-203ENST00000566078 A0A0G2JK05 382 aa26.41■■□□□ 1.82
CTCF-203ENST00000566078 hCG_38984A0A1B0GV85 526 aa26.41■■□□□ 1.82
CTCF-203ENST00000566078 C4orf17Q53FE4 359 aa26.41■■□□□ 1.82
CTCF-203ENST00000566078 MTFR2Q6P444 385 aa26.41■■□□□ 1.82
CTCF-203ENST00000566078 GFI1Q99684 422 aa26.41■■□□□ 1.82
CTCF-203ENST00000566078 PLEKHB1Q9UF11 243 aaPredicted RBP26.41■■□□□ 1.82
CTCF-203ENST00000566078 PIGLQ9Y2B2 252 aa26.41■■□□□ 1.82
CTCF-203ENST00000566078 NKX2-6A6NCS4 301 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 M0R1B8 84 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 ICMTO60725 284 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 SMPD2O60906 423 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 ADRA2CP18825 462 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 FAM3AP98173 230 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 C22orf34Q6ZV56 151 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 SEMA6DQ8NFY4 1073 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 LILRB4Q8NHJ6 448 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 SLC30A2Q9BRI3 323 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 NXF2Q9GZY0 626 aaKnown RBP26.4■■□□□ 1.82
CTCF-203ENST00000566078 RELNP78509 3460 aa26.4■■□□□ 1.82
CTCF-203ENST00000566078 B8ZZF3 427 aa26.39■■□□□ 1.82
CTCF-203ENST00000566078 FAM157BP0CG42 384 aa26.39■■□□□ 1.82
CTCF-203ENST00000566078 EPXP11678 715 aa26.39■■□□□ 1.82
CTCF-203ENST00000566078 FAHP16930 419 aa26.39■■□□□ 1.82
CTCF-203ENST00000566078 CFL1P23528 166 aaKnown RBP26.39■■□□□ 1.82
CTCF-203ENST00000566078 PPP3R1P63098 170 aa26.39■■□□□ 1.82
CTCF-203ENST00000566078 FBXL19-AS1Q494R0 122 aa26.39■■□□□ 1.82
CTCF-203ENST00000566078 SFXN4Q6P4A7 337 aa26.39■■□□□ 1.82
CTCF-203ENST00000566078 C6orf62Q9GZU0 229 aaPredicted RBP26.39■■□□□ 1.82
CTCF-203ENST00000566078 ANXA2P2A6NMY6 339 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 J3QW42 95 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 ZNF35P13682 527 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 ACKR3P25106 362 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 GSK3AP49840 483 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 GK2Q14410 553 aaPredicted RBP26.39■■□□□ 1.81
CTCF-203ENST00000566078 C3orf36Q3SXR2 165 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 MRPL21Q7Z2W9 205 aaKnown RBP26.39■■□□□ 1.81
CTCF-203ENST00000566078 DNAAF1Q8NEP3 725 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 OR5L1Q8NGL2 311 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 OR5D14Q8NGL3 314 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 CA5BP1Q8WTZ4 195 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 HCFC1P51610 2035 aa26.39■■□□□ 1.81
CTCF-203ENST00000566078 IGHV2OR16-5A0A0B4J2B6 119 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 DHRS7CA6NNS2 312 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 NOTOA8MTQ0 251 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms