RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 CFAP77Q6ZQR2 320 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 ADCK1Q86TW2 530 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 MOGAT3Q86VF5 341 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 C1orf174Q8IYL3 243 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 SPICQ8N5J4 248 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 TEX29Q8N6K0 151 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 SDR9C7Q8NEX9 313 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 OR5L1Q8NGL2 311 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 OR2AJ1Q8NGZ0 328 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 APOBEC3DQ96AK3 386 aaPredicted RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 MCUR1Q96AQ8 359 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 HAVCR1Q96D42 359 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 SAMD8Q96LT4 415 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 ZNF582Q96NG8 517 aaPredicted RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 MRI1Q9BV20 369 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 OR52D1Q9H346 318 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 ANKRD19PQ9H560 264 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 DCAF13Q9NV06 445 aaKnown RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 VSX1Q9NZR4 365 aaPredicted RBP6.15□□□□□ -1.42
SPG11-213ENST00000558988 ABCD2Q9UBJ2 740 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 OR5V1Q9UGF6 321 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 OPN4Q9UHM6 478 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 TMCC3Q9ULS5 477 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 AUP1Q9Y679 476 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 LHFPL6Q9Y693 200 aa6.15□□□□□ -1.42
SPG11-213ENST00000558988 A0A0A6YYJ9 748 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 TVP23AA6NH52 213 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 CEACAM18A8MTB9 384 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 J3QLI3 93 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 AHCYL1O43865 530 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 SCGB1D2O95969 90 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 LCATP04180 440 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 FABP3P05413 133 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 RPS2P15880 293 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 CRABP1P29762 137 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 MDH2P40926 338 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 SRP9P49458 86 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 RGS6P49758 472 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 SMIM11AP58511 58 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 LSM6P62312 80 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 GNGT1P63211 74 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.14□□□□□ -1.43
SPG11-213ENST00000558988 PPP1R8Q12972 351 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 TMEM177Q53S58 311 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 MRPL21Q7Z2W9 205 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 NAA40Q86UY6 237 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 BCL6BQ8N143 479 aaPredicted RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 OR6V1Q8N148 313 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 ZNF283Q8N7M2 679 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 SIGLECL1Q8N7X8 197 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 CYB561A3Q8NBI2 242 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 DEFB108BQ8NET1 73 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 GJC3Q8NFK1 279 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 OR8G5Q8NG78 346 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 OR9Q2Q8NGE9 314 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 OR52E2Q8NGJ4 325 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 OR51L1Q8NGJ5 315 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 OR13G1Q8NGZ3 307 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 PTP4A1Q93096 173 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 PYURFQ96I23 114 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 C7orf34Q96L11 122 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 NSMCE2Q96MF7 247 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 COG8Q96MW5 612 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 GPX7Q96SL4 187 aaPredicted RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 CDRT15Q96T59 188 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 MNTQ99583 582 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 RBM4Q9BWF3 364 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 HCAR1Q9BXC0 346 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 PLA2G12AQ9BZM1 189 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 HDHD2Q9H0R4 259 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 MYLK2Q9H1R3 596 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 MMADHCQ9H3L0 296 aaPredicted RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 EGLN3Q9H6Z9 239 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 PATZ1Q9HBE1 687 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 ESM1Q9NQ30 184 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 TNFRSF19Q9NS68 423 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 DDX28Q9NUL7 540 aaKnown RBP6.14□□□□□ -1.43
SPG11-213ENST00000558988 UFSP2Q9NUQ7 469 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 ARL8BQ9NVJ2 186 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 ZNF69Q9UC07 566 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 IL19Q9UHD0 177 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 MAGEL2Q9UJ55 1249 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 KLHL21Q9UJP4 597 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 B9D1Q9UPM9 204 aa6.14□□□□□ -1.43
SPG11-213ENST00000558988 IGLV1-36A0A0B4J1U3 117 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 OR6C68A6NDL8 312 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 TRAPPC2LH3BP13 241 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 TMEM178BH3BS89 294 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 MLNRO43193 412 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 SPARCP09486 303 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 IRF2P14316 349 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 ZNF823P16415 610 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 GATA3P23771 443 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 FPR3P25089 353 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 PRDX6P30041 224 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 GGT2P36268 569 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 GNB2P62879 340 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 HOXA4Q00056 320 aaPredicted RBP6.13□□□□□ -1.43
SPG11-213ENST00000558988 TRAP1Q12931 704 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms