RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 MITD1Q8WV92 249 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PALLDQ8WX93 1383 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 RXFP2Q8WXD0 754 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 TMEM131Q92545 1883 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 GHSRQ92847 366 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PTX4Q96A99 478 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 DCPSQ96C86 337 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 SEH1LQ96EE3 360 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 RNF170Q96K19 258 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 LINC00167Q96N53 147 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CDX2Q99626 313 aaPredicted RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 GABRG3Q99928 467 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 TMEM243Q9BU79 118 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 GGTLC1Q9BX51 225 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 HINT2Q9BX68 163 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CALN1Q9BXU9 219 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 MAP1LC3CQ9BXW4 147 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 BEX2Q9BXY8 128 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 FGF23Q9GZV9 251 aaPredicted RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 LINC00597Q9H2U6 94 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 IFI27L2Q9H2X8 130 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 HAUS4Q9H6D7 363 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 KIR3DX1Q9H7L2 352 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 REEP1Q9H902 201 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 TMEM27Q9HBJ8 222 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 MED4Q9NPJ6 270 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 LHX9Q9NQ69 397 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 RRAGDQ9NQL2 400 aaPredicted RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 TMEM100Q9NV29 134 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ADA2Q9NZK5 511 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CTSFQ9UBX1 484 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 OR12D3Q9UGF7 316 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 GPATCH8Q9UKJ3 1502 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 CES1P1Q9UKY3 287 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PSG11Q9UQ72 335 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ZNF257Q9Y2Q1 563 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 RBMX2Q9Y388 322 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 OR51B2Q9Y5P1 312 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 BZW2Q9Y6E2 419 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 COL16A1Q07092 1604 aaPredicted RBP1.01□□□□□ -2.25
USP3-209ENST00000558925 ADAMTS13Q76LX8 1427 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 IGSF9BQ9UPX0 1349 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 IGLV4-69A0A075B6H9 119 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 IGHV3OR16-9A0A0B4J2B5 98 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 A0A0J9YYE9 177 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 A0A0U1RQV1 116 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 A0A1W2PP18 115 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 CENPXA8MT69 81 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 PDZK1P1A8MUH7 402 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 DFFAO00273 331 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 RFXANKO14593 260 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 RAD51BO15315 384 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 SNAI2O43623 268 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 ZNF207O43670 478 aaKnown RBP1.01□□□□□ -2.25
USP3-209ENST00000558925 CDC40O60508 579 aaKnown RBP eCLIP1.01□□□□□ -2.25
USP3-209ENST00000558925 SPAG7O75391 227 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 REM1O75628 298 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 SC5DO75845 299 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 SLC22A5O76082 557 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 SLC25A14O95258 325 aaPredicted RBP1.01□□□□□ -2.25
USP3-209ENST00000558925 SMC2O95347 1197 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 PLEKHA8P1O95397 391 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 LCA5LO95447 670 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 TRBC1P01850 177 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 GLAP06280 429 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 TPM1P09493 284 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 CD9P21926 228 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 DTYMKP23919 212 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 IVDP26440 423 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 GNRHRP30968 328 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 CSKP41240 450 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 GALR1P47211 349 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 UCNP55089 124 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 VSX2P58304 361 aaPredicted RBP1.01□□□□□ -2.25
USP3-209ENST00000558925 ARG2P78540 354 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 LRRC63Q05C16 580 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 IFFO1Q0D2I5 559 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 OR1Q1Q15612 314 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 PRSS8Q16651 343 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 MPV17L2Q567V2 206 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 AVPI1Q5T686 147 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 TMEM236Q5W0B7 351 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 RWDD4Q6NW29 188 aaKnown RBP1.01□□□□□ -2.25
USP3-209ENST00000558925 EPGNQ6UW88 154 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 OR2W3Q7Z3T1 314 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 WDR86Q86TI4 376 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 LINC01551Q86U37 167 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 CALHM1Q8IU99 346 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 LGI3Q8N145 548 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 FAM58AQ8N1B3 248 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 Q8N9L7 120 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 OR4K5Q8NGD3 323 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 OR13C9Q8NGT0 318 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 COQ8AQ8NI60 647 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 SYNPRQ8TBG9 265 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 ASZ1Q8WWH4 475 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 FAM131CQ96AQ9 280 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 FLYWCH2Q96CP2 140 aaKnown RBP1.01□□□□□ -2.25
USP3-209ENST00000558925 HAUS1Q96CS2 278 aa1.01□□□□□ -2.25
USP3-209ENST00000558925 KCNS1Q96KK3 526 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms