RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 REEP6Q96HR9 211 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 ADAT1Q9BUB4 502 aaKnown RBP11.57□□□□□ -0.56
SHMT2-219ENST00000555563 TTTY10Q9BZA0 68 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 SP140LQ9H930 580 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 S100A14Q9HCY8 104 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 USE1Q9NZ43 259 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 ZNF319Q9P2F9 582 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 CDC42EP3Q9UKI2 254 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 COPS3Q9UNS2 423 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 LRP12Q9Y561 859 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 NPTNQ9Y639 398 aa11.57□□□□□ -0.56
SHMT2-219ENST00000555563 hCG_38984A0A1B0GV85 526 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 SLC22A31A6NKX4 558 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 PSMD9O00233 223 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 MSMBP08118 114 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 DVL1P1P54792 670 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-219ENST00000555563 FAM3AP98173 230 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 MAB21L1Q13394 359 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 ZMYND11Q15326 602 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 OR8G1Q15617 311 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 CR1LQ2VPA4 569 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 FAM120AOSQ5T036 256 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 KRT77Q7Z794 578 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 MOGAT3Q86VF5 341 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 C10orf67Q8IYJ2 551 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 CBR4Q8N4T8 237 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 SGK3Q96BR1 496 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 PGAM5Q96HS1 289 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 SHARPINQ9H0F6 387 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 OR10A2Q9H208 303 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 NIPAL2Q9H841 368 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 ADGRL4Q9HBW9 690 aa11.56□□□□□ -0.56
SHMT2-219ENST00000555563 MRPL15Q9P015 296 aaKnown RBP11.56□□□□□ -0.56
SHMT2-219ENST00000555563 TMEM178BH3BS89 294 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 CYB5R3P00387 301 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-219ENST00000555563 SBK2P0C263 348 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 CD200P41217 278 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 GATA4P43694 442 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 ALDH3A2P51648 485 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 RAD23AP54725 363 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 BTG1P62324 171 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 ROM1Q03395 351 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 GLCCI1Q86VQ1 547 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 PQLC1Q8N2U9 271 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 CELF2-AS1Q8N7Q2 184 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 OR8B12Q8NGG6 310 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 OR51F2Q8NH61 342 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 SPATA3Q8NHX4 192 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 FAM81AQ8TBF8 368 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 ASB17Q8WXJ9 295 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 TMEM186Q96B77 213 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 BEX2Q9BXY8 128 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 SLC22A4Q9H015 551 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 RGCCQ9H4X1 137 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 UBAP1Q9NZ09 502 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 H2AFY2Q9P0M6 372 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-219ENST00000555563 LPAR3Q9UBY5 353 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 NOP16Q9Y3C1 178 aaKnown RBP11.55□□□□□ -0.56
SHMT2-219ENST00000555563 ORC6Q9Y5N6 252 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 TMEM14AQ9Y6G1 99 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 FBN3Q75N90 2809 aa11.55□□□□□ -0.56
SHMT2-219ENST00000555563 IFNL4K9M1U5 179 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 FAM157CP0CG43 387 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 HNF1AP20823 631 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 CFL1P23528 166 aaKnown RBP11.54□□□□□ -0.56
SHMT2-219ENST00000555563 DDOSTP39656 456 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 PMELP40967 661 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 GSK3AP49840 483 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 MPPED2Q15777 294 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 ZNF181Q2M3W8 571 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 ZIK1Q3SY52 487 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-219ENST00000555563 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 KCTD18Q6PI47 426 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-219ENST00000555563 SLC35F2Q8IXU6 374 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 OR51G2Q8NGK0 314 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 OR8J1Q8NGP2 316 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 OR8B4Q96RC9 309 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 HIF1ANQ9NWT6 349 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 FAM206AQ9NX38 181 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 HAO2Q9NYQ3 351 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 WARS2Q9UGM6 360 aaKnown RBP11.54□□□□□ -0.56
SHMT2-219ENST00000555563 IKZF2Q9UKS7 526 aa11.54□□□□□ -0.56
SHMT2-219ENST00000555563 LRRC30A6NM36 301 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 ANKRD30BLA7E2S9 258 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 PLPP2O43688 288 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 GMDSO60547 372 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 FAM20BO75063 409 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 ZNF205O95201 554 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 APOL3O95236 402 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
SHMT2-219ENST00000555563 HTR1FP30939 366 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 MDH2P40926 338 aaKnown RBP11.53□□□□□ -0.56
SHMT2-219ENST00000555563 CDC42P60953 191 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 CXCR4P61073 352 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 MFGE8Q08431 387 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-219ENST00000555563 OR8B8Q15620 311 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 DEGS2Q6QHC5 323 aa11.53□□□□□ -0.56
SHMT2-219ENST00000555563 ZNF322Q6U7Q0 402 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms