RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FLNCQ14315 2725 aa5.26□□□□□ -1.57
VPS33B-203ENST00000554264 RELNP78509 3460 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 A0A1B0GTI1 187 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 LOC101059948A0A1B0GTJ6 334 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PQLC2LA1A4F0 135 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 GAGE12BA1L429 117 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 RNF222A6NCQ9 220 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 GAGE12HA6NDE8 117 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 METTL21EPA6NDL7 271 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OR5K4A6NMS3 321 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 C4orf51C9J302 202 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 NPIPB9F8W1W9 429 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 GOSR2O14653 212 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PIN1P1O15428 100 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OR10H2O60403 315 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 SELENOFO60613 162 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 LDB3O75112 727 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PRKRAO75569 313 aaKnown RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CTAG2O75638 210 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 SNAPINO95295 136 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CYB5AP00167 134 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 MT-ATP6P00846 226 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CD74P04233 296 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 IFNA4P05014 189 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PET100P0DJ07 73 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF35P13682 527 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 TPT1P13693 172 aaKnown RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 GTF2F2P13984 249 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 FUT1P19526 365 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PAX6P26367 422 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 GABRA3P34903 492 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 HSD11B2P80365 405 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 IGLV3-21P80748 117 aaPredicted RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 MC2RQ01718 297 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 FHL1Q13642 323 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 HMGN3Q15651 99 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF750Q32MQ0 723 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 ACTBL2Q562R1 376 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PDSS1Q5T2R2 415 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 LINC01590Q5TEZ4 76 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 STEAP1BQ6NZ63 245 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 C3orf33Q6P1S2 294 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 TMEM71Q6P5X7 295 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 IL34Q6ZMJ4 242 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 RNF44Q7L0R7 432 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 SSX6Q7RTT6 188 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PRSS45Q7RTY3 260 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF546Q86UE3 836 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OOSP2Q86WS3 158 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 MEX3DQ86XN8 651 aaKnown RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CDC20BQ86Y33 519 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 SFTPA2Q8IWL1 248 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 IZUMO1Q8IYV9 350 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 BEST3Q8N1M1 668 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF676Q8N7Q3 588 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 BMPERQ8N8U9 685 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 Q8NA96 180 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CYB561A3Q8NBI2 242 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 INO80EQ8NBZ0 244 aaPredicted RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CLEC1AQ8NC01 280 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 SDR9C7Q8NEX9 313 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OR52H1Q8NGJ2 320 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OR6K6Q8NGW6 343 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OR10K1Q8NGX5 313 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OR4K13Q8NH42 304 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CCL4L1Q8NHW4 92 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 THAP6Q8TBB0 222 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 GRHL3Q8TE85 626 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 GPX8Q8TED1 209 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 NEU4Q8WWR8 484 aaPredicted RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 MCHR2Q969V1 340 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 ADAD1Q96M93 576 aaKnown RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PDCD10Q9BUL8 212 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 SPRY4Q9C004 299 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 NKX6-2Q9C056 277 aaPredicted RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 FKRPQ9H9S5 495 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CA10Q9NS85 328 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 POT1Q9NUX5 634 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 OCIAD1Q9NX40 245 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 TAS2R3Q9NYW6 316 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 LAMP5Q9UJQ1 280 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 CLEC4AQ9UMR7 237 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 TNFSF18Q9UNG2 199 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 NTNG1Q9Y2I2 539 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 PLEKHM1Q9Y4G2 1056 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 TMEM184BQ9Y519 407 aaPredicted RBP5.25□□□□□ -1.57
VPS33B-203ENST00000554264 IER3IP1Q9Y5U9 82 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 POMT1Q9Y6A1 747 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 BSNQ9UPA5 3926 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 SDK2Q58EX2 2172 aa5.25□□□□□ -1.57
VPS33B-203ENST00000554264 NBASA2RRP1 2371 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 UNC13CQ8NB66 2214 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ICE1Q9Y2F5 2266 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 IGHV1OR21-1A0A087WYE8 117 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 A0A0B4J2A0 478 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 A0A0J9YY10 115 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 A0A1B0GVC2 190 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 A1L4Q6 167 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SERINC4A6NH21 518 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 A6NIN4 97 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms