RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 FAM3AP98173 230 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 DOC2BQ14184 412 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 SWI5Q1ZZU3 235 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 CCDC58Q4VC31 144 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 XAF1Q6GPH4 301 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 OR2T2Q6IF00 324 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 RPL22L1Q6P5R6 122 aaKnown RBP10.48□□□□□ -0.73
SHMT2-209ENST00000553949 ZNF773Q6PK81 442 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 DTX2Q86UW9 622 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 COMMD2Q86X83 199 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 OR51E1Q8TCB6 317 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 NRGNQ92686 78 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 LYZL4Q96KX0 146 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 OR5M11Q96RB7 305 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 SOX7Q9BT81 388 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 TRAF4Q9BUZ4 470 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-209ENST00000553949 LIME1Q9H400 295 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 GPR84Q9NQS5 396 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 TAAR3PQ9P1P4 343 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 ZNF391Q9UJN7 358 aa10.48□□□□□ -0.73
SHMT2-209ENST00000553949 PURGQ9UJV8 347 aaKnown RBP10.48□□□□□ -0.73
SHMT2-209ENST00000553949 LSM2Q9Y333 95 aaKnown RBP10.48□□□□□ -0.73
SHMT2-209ENST00000553949 HRNRQ86YZ3 2850 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-209ENST00000553949 TRBV2A0A0J9YWF9 115 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 hCG_38984A0A1B0GV85 526 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 GGT3PA6NGU5 568 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 OR4C45A6NMZ5 311 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 CD300LBA8K4G0 201 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 P2RY10O00398 339 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 OGG1O15527 345 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 TIMM8AO60220 97 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-209ENST00000553949 UBCP0CG48 685 aaKnown RBP10.47□□□□□ -0.73
SHMT2-209ENST00000553949 SELEP16581 610 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 GSK3AP49840 483 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 CDK5R1Q15078 307 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 SPHARQ15513 63 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 MED22Q15528 200 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 TBCEQ15813 527 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-209ENST00000553949 MOGQ16653 247 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 NKPD1Q17RQ9 610 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 ODF4Q2M2E3 257 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 ALKBH6Q3KRA9 238 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 C11orf71Q6IPW1 123 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 PAMR1Q6UXH9 720 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 RDH10Q8IZV5 341 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 SPARTQ8N0X7 666 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 SVOPQ8N4V2 548 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 FAM71F1Q96KD3 344 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-209ENST00000553949 NR1H4Q96RI1 486 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-209ENST00000553949 CCL19Q99731 98 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 HEATR1Q9H583 2144 aaKnown RBP10.47□□□□□ -0.73
SHMT2-209ENST00000553949 ACOT13Q9NPJ3 140 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 ST6GALNAC2Q9UJ37 374 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 SIRT4Q9Y6E7 314 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-209ENST00000553949 ROS1P08922 2347 aa10.47□□□□□ -0.73
SHMT2-209ENST00000553949 A0A1B0GTI1 187 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 A0A1B0GVI7 797 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 TMEM212A6NML5 194 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 IQCF6A8MYZ5 107 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 M0R233 179 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 SYT7O43581 403 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 LILRA1O75019 489 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 ZFPL1O95159 310 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 ISG15P05161 165 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 BMP4P12644 408 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 CCL1P22362 96 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 ALDH3B1P43353 468 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 MMP15P51511 669 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 TAS2R43P59537 309 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 EMX1Q04741 257 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-209ENST00000553949 ACSM1Q08AH1 577 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 OR8B8Q15620 311 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 TMEM244Q5VVB8 128 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 DMKNQ6E0U4 476 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-209ENST00000553949 DOK3Q7L591 496 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 OR5AS1Q8N127 324 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 ZFP41Q8N8Y5 198 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 PLPP7Q8NBV4 271 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 BHLHE23Q8NDY6 225 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 OR56B2PQ8NGI1 322 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 RPS4Y2Q8TD47 263 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 IGFBPL1Q8WX77 278 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 PDCD1LG2Q9BQ51 273 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 ZNF696Q9H7X3 374 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 DYNLRB1Q9NP97 96 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 CYSLTR2Q9NS75 346 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 CGGBP1Q9UFW8 167 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-209ENST00000553949 GPR160Q9UJ42 338 aa10.46□□□□□ -0.73
SHMT2-209ENST00000553949 FBXO9Q9UK97 447 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-209ENST00000553949 PLCE1Q9P212 2302 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 LOC107986453A0A1B0GWG9 222 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 LOC390937A0A1W2PQ73 354 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 PLSCR5A0PG75 271 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 H3BSH0 61 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 MTRF1O75570 445 aaKnown RBP10.45□□□□□ -0.74
SHMT2-209ENST00000553949 DHRS3O75911 302 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 RAF1P04049 648 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 NAT2P11245 290 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 ATP6V1B1P15313 513 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 PCMT1P22061 227 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms