RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 REEP6Q96HR9 211 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 GAL3ST1Q99999 423 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 SLC22A4Q9H015 551 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 S100A14Q9HCY8 104 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 BRD7Q9NPI1 651 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 MRPL15Q9P015 296 aaKnown RBP17.17■□□□□ 0.34
FOXA1-203ENST00000553751 COPS3Q9UNS2 423 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 hCG_38984A0A1B0GV85 526 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 ISPDA4D126 451 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 MSMBP08118 114 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 CD200P41217 278 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 GATA4P43694 442 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 ALDH3A2P51648 485 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 DVL1P1P54792 670 aaPredicted RBP17.16■□□□□ 0.34
FOXA1-203ENST00000553751 FAM3AP98173 230 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 TIGD6Q17RP2 521 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 FAM120AOSQ5T036 256 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 KRT77Q7Z794 578 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 GID4Q8IVV7 300 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 CBR4Q8N4T8 237 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 CELF2-AS1Q8N7Q2 184 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 RAB39BQ96DA2 213 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 ADAT1Q9BUB4 502 aaKnown RBP17.16■□□□□ 0.34
FOXA1-203ENST00000553751 SHARPINQ9H0F6 387 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 OR10A2Q9H208 303 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 NIPAL2Q9H841 368 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 LPAR2Q9HBW0 351 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 ADGRL4Q9HBW9 690 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 H2AFY2Q9P0M6 372 aaPredicted RBP17.16■□□□□ 0.34
FOXA1-203ENST00000553751 LPAR3Q9UBY5 353 aa17.16■□□□□ 0.34
FOXA1-203ENST00000553751 CUBNO60494 3623 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 TMEM178BH3BS89 294 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 IFNL4K9M1U5 179 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 RAD23AP54725 363 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 BTG1P62324 171 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 ROM1Q03395 351 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 ZMYND11Q15326 602 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 OR8G1Q15617 311 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 CR1LQ2VPA4 569 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 GFOD2Q3B7J2 385 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 KCTD18Q6PI47 426 aaPredicted RBP17.15■□□□□ 0.34
FOXA1-203ENST00000553751 MOGAT3Q86VF5 341 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 OR8J1Q8NGP2 316 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 DVL3Q92997 716 aaPredicted RBP17.15■□□□□ 0.34
FOXA1-203ENST00000553751 PGAM5Q96HS1 289 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 BEX2Q9BXY8 128 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 TTTY10Q9BZA0 68 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 RGCCQ9H4X1 137 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 HAO2Q9NYQ3 351 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 NOP16Q9Y3C1 178 aaKnown RBP17.15■□□□□ 0.34
FOXA1-203ENST00000553751 TMEM14AQ9Y6G1 99 aa17.15■□□□□ 0.34
FOXA1-203ENST00000553751 E9PQ18 207 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 PSMD9O00233 223 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 GMDSO60547 372 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 CFL1P23528 166 aaKnown RBP17.14■□□□□ 0.33
FOXA1-203ENST00000553751 DDOSTP39656 456 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 PMELP40967 661 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF181Q2M3W8 571 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 PRAMEF6Q5VXH4 476 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 DEGS2Q6QHC5 323 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 IL17RELQ6ZVW7 336 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF771Q7L3S4 317 aaPredicted RBP17.14■□□□□ 0.33
FOXA1-203ENST00000553751 GLCCI1Q86VQ1 547 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 SLC35F2Q8IXU6 374 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 PQLC1Q8N2U9 271 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 OR51F2Q8NH61 342 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 Q8TCH9 128 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 ASB17Q8WXJ9 295 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 TMEM186Q96B77 213 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 OR8B4Q96RC9 309 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 ORC6Q9Y5N6 252 aa17.14■□□□□ 0.33
FOXA1-203ENST00000553751 ATRQ13535 2644 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 PTBP3O95758 552 aaKnown RBP17.13■□□□□ 0.33
FOXA1-203ENST00000553751 CYB5R3P00387 301 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-203ENST00000553751 SBK2P0C263 348 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 GSK3AP49840 483 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 CDC42P60953 191 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 OR8B8Q15620 311 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 TMEM155Q4W5P6 130 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 LRRC28Q86X40 367 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF679Q8IYX0 411 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 OR8B12Q8NGG6 310 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 FAM81AQ8TBF8 368 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 HRASLS5Q96KN8 279 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 MNTQ99583 582 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 MROQ9BYG7 248 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 HIF1ANQ9NWT6 349 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 CLN6Q9NWW5 311 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 FAM206AQ9NX38 181 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 UBAP1Q9NZ09 502 aa17.13■□□□□ 0.33
FOXA1-203ENST00000553751 WARS2Q9UGM6 360 aaKnown RBP17.13■□□□□ 0.33
FOXA1-203ENST00000553751 FAM157CP0CG43 387 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 HTR1FP30939 366 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 CXCR4P61073 352 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 MPPED2Q15777 294 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 ZIK1Q3SY52 487 aaPredicted RBP17.12■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF322Q6U7Q0 402 aaPredicted RBP17.12■□□□□ 0.33
FOXA1-203ENST00000553751 KLBQ86Z14 1044 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 SPICQ8N5J4 248 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 OR51G2Q8NGK0 314 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms