RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 POLR2J3Q9H1A7 115 aaKnown RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 DPAGT1Q9H3H5 408 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 MMADHCQ9H3L0 296 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 TOR3AQ9H497 397 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 KAT8Q9H7Z6 458 aaKnown RBP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.96□□□□□ -1.46
ATXN3-219ENST00000553488 NECAP2Q9NVZ3 263 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 RIMS3Q9UJD0 308 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 MYRFQ9Y2G1 1151 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 MED31Q9Y3C7 131 aa5.96□□□□□ -1.46
ATXN3-219ENST00000553488 TRAV27A0A087WT01 109 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 A0A1B0GW55 424 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 RER1O15258 196 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 POLR3GO15318 223 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 ADAM20O43506 726 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 OR10H3O60404 316 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 SHOX2O60902 331 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 VIMP08670 466 aaKnown RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 FBP1P09467 338 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4L2P0CJ85 424 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4L3P0CJ86 424 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4L4P0CJ87 422 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4L5P0CJ88 424 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4L6P0CJ89 424 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4L7P0CJ90 424 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF26P17031 533 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 FPR3P25089 353 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 TGFBR2P37173 567 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 GUCA1AP43080 201 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 ARF6P62330 175 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 HIST1H3AP68431 136 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 NFYCQ13952 458 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 RSPO1Q2MKA7 263 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 HIST2H3PS2Q5TEC6 136 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 SLC35E4Q6ICL7 350 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 WDR93Q6P2C0 686 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4L9Q6RFH8 374 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 METAP1DQ6UB28 335 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 HIST2H3AQ71DI3 136 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 FAM122BQ7Z309 247 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 VMO1Q7Z5L0 202 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 MICU2Q8IYU8 434 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 FGFRL1Q8N441 504 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DPP10Q8N608 796 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 PPP1R35Q8TAP8 253 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 RASSF5Q8WWW0 418 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 APOBEC3DQ96AK3 386 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-219ENST00000553488 PHF21AQ96BD5 680 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 ZBTB9Q96C00 473 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 BPIFA2Q96DR5 249 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 CGREF1Q99674 301 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 WDR76Q9H967 626 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 UFSP2Q9NUQ7 469 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 TMEM100Q9NV29 134 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 ERVK-18Q9QC07 812 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 DUX4Q9UBX2 424 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 FOXJ3Q9UPW0 622 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 SIGLEC9Q9Y336 463 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 SH3GLB1Q9Y371 365 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 ADAM18Q9Y3Q7 739 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 KPTNQ9Y664 436 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 LHFPL6Q9Y693 200 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
ATXN3-219ENST00000553488 A0A1B0GVI7 797 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 ELOVL7A1L3X0 281 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 PRSS37A4D1T9 235 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 OOEPA6NGQ2 149 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 RNASEK-C17orf49H0YIS7 233 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 IMPA2O14732 288 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 IFI30P13284 250 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 IRF2P14316 349 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 ANOS1P23352 680 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 GABRA5P31644 462 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 SLC18A1P54219 525 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 DLX1P56177 255 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 LSM6P62312 80 aaKnown RBP5.94□□□□□ -1.46
ATXN3-219ENST00000553488 CD83Q01151 205 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 GK2Q14410 553 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-219ENST00000553488 RNF151Q2KHN1 245 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 CDONQ4KMG0 1287 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 AGKQ53H12 422 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 BEND6Q5SZJ8 279 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-219ENST00000553488 SFRP4Q6FHJ7 346 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-219ENST00000553488 C1orf122Q6ZSJ8 110 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 Q6ZTK2 550 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 LHFPL2Q6ZUX7 228 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 BTN2A1Q7KYR7 527 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 FAM90A1Q86YD7 464 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 NRMQ8IXM6 262 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 GCSAMQ8N6F7 178 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 KLHDC1Q8N7A1 406 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 C11orf44Q8N8P7 122 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 LY6G5BQ8NDX9 201 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 OR5L1Q8NGL2 311 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 OR13C2Q8NGS9 318 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 OR11L1Q8NGX0 322 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 OR51A7Q8NH64 312 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 OR10A6Q8NH74 314 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 OR5R1Q8NH85 324 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms