RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ZNF430Q9H8G1 570 aaPredicted RBP3.45□□□□□ -1.86
USP44-208ENST00000552440 ZBTB20Q9HC78 741 aaPredicted RBP3.45□□□□□ -1.86
USP44-208ENST00000552440 GIN1Q9NXP7 522 aa3.45□□□□□ -1.86
USP44-208ENST00000552440 KLK11Q9UBX7 282 aa3.45□□□□□ -1.86
USP44-208ENST00000552440 NDUFAF1Q9Y375 327 aa3.45□□□□□ -1.86
USP44-208ENST00000552440 NUP153P49790 1475 aaKnown RBP3.45□□□□□ -1.86
USP44-208ENST00000552440 IGLV5-39A0A0G2JS06 123 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 RPS10-NUDT3A0A1W2PQS6 291 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ISPDA4D126 451 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 LINC01553A4QN01 128 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SRRM3A6NNA2 597 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 INAFM1C9JVW0 142 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 LOC110117498-PIK3R3F6TDL0 507 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SURF4O15260 269 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 DPM1O60762 260 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SEC24AO95486 1093 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ARG1P05089 322 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 CTSLP07711 333 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 CRABP1P29762 137 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ARL2P36404 184 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 RFX2P48378 723 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZNF121P58317 390 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 FLI1Q01543 452 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 SLC25A11Q02978 314 aaKnown RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 MS4A13Q5J8X5 152 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 BRMS1LQ5PSV4 323 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 TPTE2P1Q5T6R2 138 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 CST9Q5W186 159 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 EPGNQ6UW88 154 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PRSS41Q7RTY9 318 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 DPPA2Q7Z7J5 298 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PIM3Q86V86 326 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SVOPLQ8N434 492 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ARRDC1Q8N5I2 433 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 OR52B6Q8NGF0 335 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 OR10W1Q8NGF6 305 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 OR56B4Q8NH76 319 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 C16orf52Q8NHV5 167 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 MAFIPQ8WZ33 124 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 BORCS5Q969J3 196 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 RCN3Q96D15 328 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PHB2Q99623 299 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 GPR21Q99679 349 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 RASL11BQ9BPW5 248 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 KCTD14Q9BQ13 255 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 SLC19A3Q9BZV2 496 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 REEP1Q9H902 201 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 FBXO5Q9UKT4 447 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 CES1P1Q9UKY3 287 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 MMP17Q9ULZ9 603 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 OR51B2Q9Y5P1 312 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 NUP155O75694 1391 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 MSH6P52701 1360 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 KIF24Q5T7B8 1368 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 CFAP74Q9C0B2 1584 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 REREQ9P2R6 1566 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SETBP1Q9Y6X0 1596 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PLCH2O75038 1416 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SMIM9A6NGZ8 99 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SOCS2O14508 198 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 UBDO15205 165 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 FABP7O15540 132 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZNF749O43361 778 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 RAD51CO43502 376 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZG16O60844 167 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ICOSLGO75144 302 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 NTN1O95631 604 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PTTG1O95997 202 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 MT-ND4P03905 459 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 OR5AL1P0C617 328 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZNF12P17014 697 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SHMT2P34897 504 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 RPA3P35244 121 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 PPOXP50336 477 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 UBE2E1P51965 193 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 BCL2L1Q07817 233 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SKP2Q13309 424 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 EIF4EBP2Q13542 120 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 RBMS2Q15434 407 aaKnown RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 ATP6AP1Q15904 470 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZNF726P1Q15940 193 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 TFAP2EQ6VUC0 442 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 TMEM150AQ86TG1 271 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 THOC6Q86W42 341 aaKnown RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 NIT1Q86X76 327 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 CLVS1Q8IUQ0 354 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 LACC1Q8IV20 430 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 SPICQ8N5J4 248 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 METTL13Q8N6R0 699 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 ZNF557Q8N988 423 aaPredicted RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 HSD17B11Q8NBQ5 300 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 OR4C3Q8NH37 302 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 HAVCR2Q8TDQ0 301 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 PCNPQ8WW12 178 aaKnown RBP3.44□□□□□ -1.86
USP44-208ENST00000552440 TMEM234Q8WY98 164 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 DNAJC19Q96DA6 116 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 WBP1Q96G27 269 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 TMEM80Q96HE8 168 aa3.44□□□□□ -1.86
USP44-208ENST00000552440 UBE2E2Q96LR5 201 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms