RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 NCK1P16333 377 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 HIST1H1CP16403 213 aaKnown RBP10.66□□□□□ -0.7
PTCH1-218ENST00000548945 OTX1P32242 354 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-218ENST00000548945 MPPED2Q15777 294 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 METTL11BQ5VVY1 283 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 MRPL21Q7Z2W9 205 aaKnown RBP10.66□□□□□ -0.7
PTCH1-218ENST00000548945 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 SPERTQ8NA61 448 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 TBC1D15Q8TC07 691 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 SPTSSAQ969W0 71 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 ZNF799Q96GE5 643 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 WDFY2Q96P53 400 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 TBX15Q96SF7 602 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 MMP27Q9H306 513 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 OR52D1Q9H346 318 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 RPRD1BQ9NQG5 326 aaKnown RBP10.66□□□□□ -0.7
PTCH1-218ENST00000548945 UFSP2Q9NUQ7 469 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 ACOXLQ9NUZ1 547 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 MRPL15Q9P015 296 aaKnown RBP10.66□□□□□ -0.7
PTCH1-218ENST00000548945 PDP1Q9P0J1 537 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-218ENST00000548945 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 A0A0G2JK05 382 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 CIB2O75838 187 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 ECDO95905 644 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-218ENST00000548945 SFTPBP07988 381 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 CA6P23280 308 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 MZT1Q08AG7 82 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 SPATS1Q496A3 300 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 SAMD4BQ5PRF9 694 aaKnown RBP10.65□□□□□ -0.7
PTCH1-218ENST00000548945 RUSC1-AS1Q66K80 236 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 GLYATQ6IB77 296 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 NAA40Q86UY6 237 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 OR4K13Q8NH42 304 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 OR52J3Q8NH60 311 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 CDRT15Q96T59 188 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 ADAT1Q9BUB4 502 aaKnown RBP10.65□□□□□ -0.7
PTCH1-218ENST00000548945 IFT27Q9BW83 186 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 OPA3Q9H6K4 179 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 ADA2Q9NZK5 511 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 KAAG1Q9UBP8 84 aa10.65□□□□□ -0.7
PTCH1-218ENST00000548945 IGHV1-69DA0A0B4J2H0 117 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 OR6C68A6NDL8 312 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 OOEPA6NGQ2 149 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 ADAM20O43506 726 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 GMNNO75496 209 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 IGHV1-69P01742 117 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 NOS3P29474 1203 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 IFNGR2P38484 337 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 PRSS12P56730 875 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 OR8B8Q15620 311 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 DRAM2Q6UX65 266 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 RHOUQ7L0Q8 258 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 LDLRAD3Q86YD5 345 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 C19orf18Q8NEA5 215 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 MAP6Q96JE9 813 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 CLPTM1LQ96KA5 538 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 DMRTB1Q96MA1 342 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 GORASP2Q9H8Y8 452 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 SMURF1Q9HCE7 757 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 TNFRSF19Q9NS68 423 aa10.64□□□□□ -0.71
PTCH1-218ENST00000548945 MRPL22Q9NWU5 206 aaKnown RBP10.64□□□□□ -0.71
PTCH1-218ENST00000548945 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-218ENST00000548945 GGT3PA6NGU5 568 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 CLPXO76031 633 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 DIRAS1O95057 198 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 GADD45GO95257 159 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 LHBP01229 141 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 ZNF823P16415 610 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 IER3P46695 156 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 GSSP48637 474 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 ZNF92Q03936 586 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 SRSF4Q08170 494 aaKnown RBP10.63□□□□□ -0.71
PTCH1-218ENST00000548945 TEX36Q5VZQ5 186 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-218ENST00000548945 FAM86B1Q8N7N1 296 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 OR4C15Q8NGM1 316 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 C14orf119Q9NWQ9 140 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 RNF114Q9Y508 228 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 KPTNQ9Y664 436 aa10.63□□□□□ -0.71
PTCH1-218ENST00000548945 OR10H3O60404 316 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 GPR137BO60478 399 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 SEMG1P04279 462 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 HSD17B1P14061 328 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 DDOSTP39656 456 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 ELF3P78545 371 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-218ENST00000548945 SPIBQ01892 262 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTCH1-218ENST00000548945 TSPAN31Q12999 210 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 SNAI3Q3KNW1 292 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 C1orf146Q5VVC0 180 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 ASPHD2Q6ICH7 369 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 RPL13AP3Q6NVV1 102 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 BTN2A1Q7KYR7 527 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 FAM90A1Q86YD7 464 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 GCSAMQ8N6F7 178 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms